Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GJS32_RS07180 Genome accession   NZ_CP046040
Coordinates   1506874..1507683 (-) Length   269 a.a.
NCBI ID   WP_014623187.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain OH-71905     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1501874..1512683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJS32_RS07170 (GJS32_07170) rnc 1503508..1504200 (-) 693 WP_038674782.1 ribonuclease III -
  GJS32_RS07175 (GJS32_07175) - 1504459..1505973 (-) 1515 WP_014623184.1 helix-turn-helix domain-containing protein -
  GJS32_RS07180 (GJS32_07180) vicX 1506874..1507683 (-) 810 WP_014623187.1 MBL fold metallo-hydrolase Regulator
  GJS32_RS07185 (GJS32_07185) vicK 1507687..1509039 (-) 1353 WP_014623188.1 cell wall metabolism sensor histidine kinase VicK Regulator
  GJS32_RS07190 (GJS32_07190) vicR 1509032..1509742 (-) 711 WP_012515994.1 response regulator YycF Regulator
  GJS32_RS07195 (GJS32_07195) - 1509951..1510967 (-) 1017 WP_014623189.1 DUF3114 domain-containing protein -
  GJS32_RS07200 (GJS32_07200) - 1511013..1512275 (-) 1263 WP_014623190.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30025.10 Da        Isoelectric Point: 5.5344

>NTDB_id=400470 GJS32_RS07180 WP_014623187.1 1506874..1507683(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain OH-71905]
MSEVGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGIMARKYNLD
VYANEKTWQMIDERHMIGNLDVTQKHVFERGKTMTFGDIDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRLAG
IIENADGYLIESNHDVEILRAGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGNKTKKIYLGHLSQENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=400470 GJS32_RS07180 WP_014623187.1 1506874..1507683(-) (vicX) [Streptococcus equi subsp. zooepidemicus strain OH-71905]
ATGAGTGAGGTTGGTTTTAAATATAGTATTTTAGCATCAGGATCGACAGGTAACTGCTTTTACTTGGAAACGCCCAAGAA
GCGGTTGTTGATTGATGCAGGACTGACTGGAAAGAAAATCACCAGTCTCCTTGCTGAGATTGACAGAAGACCTGAGGATT
TGGATGCTATCTTGATTACCCACGAGCATTCCGACCATATCAAGGGTGTTGGAATCATGGCTCGAAAATATAACCTAGAT
GTCTATGCCAATGAAAAGACTTGGCAGATGATTGATGAGCGTCATATGATTGGCAACCTAGACGTCACACAAAAGCATGT
CTTTGAAAGAGGTAAGACCATGACCTTTGGAGACATTGACATTGAGAGCTTTGGTGTTAGTCATGACGCTATAGACCCAC
AGTTTTACCGCATTATGAAGGATAACAAGTCCTTTGTCATGCTGACGGATACAGGATATGTGAGCGACCGCTTGGCTGGG
ATCATTGAAAATGCTGACGGCTACTTGATTGAGTCAAATCACGATGTGGAGATATTGCGAGCCGGCTCTTATCCTTGGAG
CCTCAAGCAGCGAATCTTATCTGACCTAGGGCATTTATCCAATGAAGATGGTGCCGGTGCCATGATTCGAAGCTTGGGCA
ATAAAACCAAGAAAATCTATCTCGGTCACCTAAGTCAGGAGAACAATATCAAAGAATTAGCCCACATGACAATGGTCAAT
CAGCTAGCAATGGCAGATTTAGGTGTTGGAACAGATTTTACTGTTCATGACACCTCACCAGATACCGCCTGTCCCTTGAC
AGACATCTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751

Multiple sequence alignment