Detailed information NTG0400448

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: GJS32_RS01500
• Genome accession: NZ_CP046040
• Coordinates: 292179..293225 (+)
• Length: 348 a.a.
• NCBI ID: WP_014622278.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain OH-71905
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 287179..298225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJS32_RS01485 (GJS32_01485)	-	288387..290045 (+)	1659	WP_012678547.1	peptide ABC transporter substrate-binding protein	-
GJS32_RS01490 (GJS32_01490)	-	290212..291126 (+)	915	WP_012514937.1	ABC transporter permease	-
GJS32_RS01495 (GJS32_01495)	-	291136..292167 (+)	1032	WP_014622277.1	ABC transporter permease	-
GJS32_RS01500 (GJS32_01500)	oppD	292179..293225 (+)	1047	WP_014622278.1	ABC transporter ATP-binding protein	Regulator
GJS32_RS01505 (GJS32_01505)	amiF	293225..294160 (+)	936	WP_012514940.1	ABC transporter ATP-binding protein	Regulator
GJS32_RS01510 (GJS32_01510)	rnjA	294790..296472 (-)	1683	WP_012514941.1	ribonuclease J1	-
GJS32_RS01515 (GJS32_01515)	-	296474..296704 (-)	231	WP_014622279.1	DNA-dependent RNA polymerase subunit epsilon	-
GJS32_RS01520 (GJS32_01520)	tsaB	296990..297688 (+)	699	WP_014622280.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
GJS32_RS01525 (GJS32_01525)	rimI	297691..298116 (+)	426	WP_014622281.1	ribosomal protein S18-alanine N-acetyltransferase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38542.47 Da
• Isoelectric Point: 6.8385

>NTDB_id=400448 GJS32_RS01500 WP_014622278.1 292179..293225(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain OH-71905]
MTNETILSVKNLHVDFKTYAGDVKAIRNISFELKKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGNICFKGKQLNEL
KEEEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEAIMIHQSIHKTEALKRALDLMRQVGIPNAEEHLKDYPHQWSGGM
RQRAVIAIALAANPDILIADEPTTALDVTIQAQILKLMKDIQAQTASSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYHPQHPYTWGLLNSMPTTATAAGSLRSIPGTPPDLLNPPKGDAFAARNEFALDIDHIKEPPMFKVSDSHYAATWLL
DERAPKITPPFPIRKRWAKWQEMEERKA

Nucleotide

• Length: 1047 bp

>NTDB_id=400448 GJS32_RS01500 WP_014622278.1 292179..293225(+) (oppD) [Streptococcus equi subsp. zooepidemicus strain OH-71905]
ATGACGAATGAAACCATTTTAAGTGTCAAAAACCTCCATGTTGATTTTAAAACCTACGCTGGAGATGTTAAGGCGATTCG
TAATATCAGCTTTGAGTTAAAAAAGGGAGAGACTCTTGCTATTGTGGGAGAATCAGGCTCAGGAAAATCTGTAACCACTC
GCACGCTGATGGGGTTAAATGCTAAGAATGCAAGTATTTCAGGGAATATTTGCTTTAAGGGCAAGCAGCTCAATGAGCTG
AAAGAGGAGGAATGGGTGAAGGTGCGTGGCAATGAAATTGCCATGATCTTTCAGGATCCGATGACCAGCCTTGATCCTAC
CATGACAATTGGCATGCAGATTGCAGAGGCAATAATGATTCATCAAAGCATTCATAAGACAGAAGCCTTGAAGCGTGCTT
TAGACCTGATGCGTCAGGTTGGTATCCCAAATGCTGAGGAGCACCTTAAGGATTACCCACATCAGTGGTCTGGGGGCATG
CGGCAACGGGCTGTTATTGCCATTGCTCTAGCTGCCAATCCTGATATTTTGATTGCAGATGAGCCGACAACAGCCCTTGA
TGTTACCATTCAGGCCCAGATTTTGAAGCTGATGAAGGATATTCAGGCTCAGACCGCATCATCGATTATTTTTATTACAC
ATGACCTTGGTGTTGTTGCTGGAATGGCAGATCGTGTTGCTGTCATGTATGCTGGAAAAATTGTTGAATATGGAACGGTT
GATGAAGTATTTTACCACCCGCAGCACCCTTATACCTGGGGATTGCTCAATTCGATGCCAACAACAGCTACTGCAGCAGG
TAGCTTGAGGTCTATTCCCGGAACGCCACCAGATTTATTAAACCCTCCAAAGGGTGATGCATTTGCTGCCCGGAATGAGT
TTGCCCTAGACATTGACCATATCAAAGAGCCTCCAATGTTCAAGGTAAGTGACAGCCACTACGCAGCAACCTGGCTGCTA
GATGAGCGCGCTCCTAAAATAACCCCTCCATTCCCAATCCGCAAGCGTTGGGCAAAATGGCAGGAAATGGAAGAGAGGAA
GGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.251	99.713	0.79
amiE	Streptococcus salivarius strain HSISS4	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMG 18311	56.325	95.402	0.537
amiE	Streptococcus thermophilus LMD-9	56.325	95.402	0.537