Detailed information
Bioinformatically predicted
Overview
| Name | comC | Type | Machinery gene |
| Locus tag | GJ664_RS03120 | Genome accession | NZ_CP046037 |
| Coordinates | 613529..614218 (+) | Length | 229 a.a. |
| NCBI ID | WP_025015997.1 | Uniprot ID | A0AAF0KA01 |
| Organism | Latilactobacillus sakei strain CBA3614 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 608529..619218
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJ664_RS03100 (GJ664_03100) | - | 608971..609522 (+) | 552 | WP_025015996.1 | cysteine hydrolase family protein | - |
| GJ664_RS03105 (GJ664_03105) | fusA | 610092..612179 (-) | 2088 | WP_016265721.1 | elongation factor G | - |
| GJ664_RS03110 (GJ664_03110) | rpsG | 612275..612745 (-) | 471 | WP_004270185.1 | 30S ribosomal protein S7 | - |
| GJ664_RS03115 (GJ664_03115) | rpsL | 612835..613248 (-) | 414 | WP_004270179.1 | 30S ribosomal protein S12 | - |
| GJ664_RS03120 (GJ664_03120) | comC | 613529..614218 (+) | 690 | WP_025015997.1 | prepilin peptidase | Machinery gene |
| GJ664_RS03125 (GJ664_03125) | - | 614222..614794 (-) | 573 | WP_025015998.1 | isochorismatase family protein | - |
| GJ664_RS03130 (GJ664_03130) | rpoC | 614968..618612 (-) | 3645 | WP_035147345.1 | DNA-directed RNA polymerase subunit beta' | - |
Sequence
Protein
Download Length: 229 a.a. Molecular weight: 26178.49 Da Isoelectric Point: 7.2085
>NTDB_id=400413 GJ664_RS03120 WP_025015997.1 613529..614218(+) (comC) [Latilactobacillus sakei strain CBA3614]
MLLYLIIFYSGACCASFLTVCAWRLPIEKSIITPRSHCDCCQQPLAWHDLLPLFSYLYLHGHCRTCHAQIKPTFLFSELI
GGLLACFIFSESLSWDLAYLLVILFYISLVDLFYYILYPIPLFASLVPLFYLYWPQNHWLGAIVFCCGLLLTTYWASGFG
FGDVELLTILTLWVGLESVLRILLAACLICILFQGIKKIWPSPKQATRQIPFIPYISMGVVILLLQTPQ
MLLYLIIFYSGACCASFLTVCAWRLPIEKSIITPRSHCDCCQQPLAWHDLLPLFSYLYLHGHCRTCHAQIKPTFLFSELI
GGLLACFIFSESLSWDLAYLLVILFYISLVDLFYYILYPIPLFASLVPLFYLYWPQNHWLGAIVFCCGLLLTTYWASGFG
FGDVELLTILTLWVGLESVLRILLAACLICILFQGIKKIWPSPKQATRQIPFIPYISMGVVILLLQTPQ
Nucleotide
Download Length: 690 bp
>NTDB_id=400413 GJ664_RS03120 WP_025015997.1 613529..614218(+) (comC) [Latilactobacillus sakei strain CBA3614]
ATGTTACTTTATTTAATCATCTTTTATAGCGGTGCTTGTTGCGCCTCATTTCTAACCGTTTGCGCCTGGCGCTTACCCAT
CGAAAAGTCCATTATCACACCACGTTCGCACTGCGATTGCTGTCAGCAACCACTGGCTTGGCATGATTTATTACCACTAT
TCAGCTACCTATACTTACATGGCCACTGCCGCACTTGTCATGCTCAGATTAAGCCCACTTTTTTATTCAGCGAACTAATT
GGTGGTCTATTGGCCTGCTTCATTTTTAGCGAATCCCTTTCTTGGGACCTCGCTTATTTACTCGTGATTCTCTTTTATAT
CAGTCTCGTTGACCTCTTCTACTATATTCTCTATCCAATCCCCTTATTCGCATCACTGGTGCCCCTCTTTTATTTGTATT
GGCCACAGAATCATTGGCTAGGAGCCATCGTCTTTTGCTGCGGGCTGTTGCTCACCACTTACTGGGCGTCTGGTTTTGGC
TTTGGTGATGTCGAGTTACTCACTATCCTGACGCTCTGGGTGGGTCTTGAATCCGTTTTACGAATTCTCTTGGCGGCCTG
TCTAATCTGTATTCTATTTCAAGGCATCAAAAAAATCTGGCCATCGCCTAAACAAGCGACGCGCCAGATTCCGTTTATCC
CCTATATATCGATGGGTGTGGTGATACTACTCCTACAAACACCACAATAA
ATGTTACTTTATTTAATCATCTTTTATAGCGGTGCTTGTTGCGCCTCATTTCTAACCGTTTGCGCCTGGCGCTTACCCAT
CGAAAAGTCCATTATCACACCACGTTCGCACTGCGATTGCTGTCAGCAACCACTGGCTTGGCATGATTTATTACCACTAT
TCAGCTACCTATACTTACATGGCCACTGCCGCACTTGTCATGCTCAGATTAAGCCCACTTTTTTATTCAGCGAACTAATT
GGTGGTCTATTGGCCTGCTTCATTTTTAGCGAATCCCTTTCTTGGGACCTCGCTTATTTACTCGTGATTCTCTTTTATAT
CAGTCTCGTTGACCTCTTCTACTATATTCTCTATCCAATCCCCTTATTCGCATCACTGGTGCCCCTCTTTTATTTGTATT
GGCCACAGAATCATTGGCTAGGAGCCATCGTCTTTTGCTGCGGGCTGTTGCTCACCACTTACTGGGCGTCTGGTTTTGGC
TTTGGTGATGTCGAGTTACTCACTATCCTGACGCTCTGGGTGGGTCTTGAATCCGTTTTACGAATTCTCTTGGCGGCCTG
TCTAATCTGTATTCTATTTCAAGGCATCAAAAAAATCTGGCCATCGCCTAAACAAGCGACGCGCCAGATTCCGTTTATCC
CCTATATATCGATGGGTGTGGTGATACTACTCCTACAAACACCACAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comC | Latilactobacillus sakei subsp. sakei 23K |
98.69 |
100 |
0.987 |