Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | GJ664_RS00765 | Genome accession | NZ_CP046037 |
| Coordinates | 149521..150528 (-) | Length | 335 a.a. |
| NCBI ID | WP_076648212.1 | Uniprot ID | - |
| Organism | Latilactobacillus sakei strain CBA3614 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 144521..155528
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJ664_RS00725 (GJ664_00725) | - | 144856..145314 (-) | 459 | WP_035145008.1 | hypothetical protein | - |
| GJ664_RS00730 (GJ664_00730) | - | 145369..146565 (-) | 1197 | WP_025016389.1 | acetate/propionate family kinase | - |
| GJ664_RS00735 (GJ664_00735) | - | 146587..147597 (-) | 1011 | WP_025016388.1 | class I SAM-dependent methyltransferase | - |
| GJ664_RS00740 (GJ664_00740) | - | 147721..148059 (-) | 339 | WP_056947123.1 | hypothetical protein | - |
| GJ664_RS00745 (GJ664_00745) | comGF | 148022..148534 (-) | 513 | WP_025016386.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GJ664_RS00750 (GJ664_00750) | comGE | 148509..148814 (-) | 306 | WP_025016385.1 | hypothetical protein | Machinery gene |
| GJ664_RS00755 (GJ664_00755) | comGD | 148801..149253 (-) | 453 | WP_076648209.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| GJ664_RS00760 (GJ664_00760) | comGC | 149225..149524 (-) | 300 | WP_076645268.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| GJ664_RS00765 (GJ664_00765) | comGB | 149521..150528 (-) | 1008 | WP_076648212.1 | type II secretion system F family protein | Machinery gene |
| GJ664_RS00770 (GJ664_00770) | comGA | 150521..151411 (-) | 891 | WP_076648214.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GJ664_RS00775 (GJ664_00775) | - | 151526..152257 (-) | 732 | WP_011375002.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| GJ664_RS00780 (GJ664_00780) | - | 152348..152848 (-) | 501 | WP_016265379.1 | VanZ family protein | - |
| GJ664_RS00785 (GJ664_00785) | - | 152945..153319 (+) | 375 | WP_011375004.1 | hypothetical protein | - |
| GJ664_RS00795 (GJ664_00795) | - | 153506..154120 (-) | 615 | WP_016265380.1 | hypothetical protein | - |
| GJ664_RS00800 (GJ664_00800) | - | 154117..154905 (-) | 789 | WP_061827022.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 335 a.a. Molecular weight: 38444.37 Da Isoelectric Point: 9.2248
>NTDB_id=400406 GJ664_RS00765 WP_076648212.1 149521..150528(-) (comGB) [Latilactobacillus sakei strain CBA3614]
MYKLRQQAQFYADFLQLLGRLLENGFSLQQAFAFLPIVFPKQRQWLNQVNQALEKGDSLAVSLAHVDFPTDYVGQIELTE
LQGNLGQCLWHLGQIQSIRQKRRREIRGVLAYPLFLLAFLGGLIGLLRHYLLPEIAQITPESNQTGSPLNHVILWGFLLV
LVLLIMGSGLFMVYRRLPVLVRLQKAFKWPIIGRDIQQYYHYCLLFDLSTCLQNGLKLTEICALQKQLQQNTWLVTLVAQ
LEVVLASGQSLDAYLSRSAFFPQSLRLVLAKHNLTQQTTDEITMLANLQYTELQKQLQRKVSWLQPILFILIGLIIICTY
LSILLPLYQTMEGIS
MYKLRQQAQFYADFLQLLGRLLENGFSLQQAFAFLPIVFPKQRQWLNQVNQALEKGDSLAVSLAHVDFPTDYVGQIELTE
LQGNLGQCLWHLGQIQSIRQKRRREIRGVLAYPLFLLAFLGGLIGLLRHYLLPEIAQITPESNQTGSPLNHVILWGFLLV
LVLLIMGSGLFMVYRRLPVLVRLQKAFKWPIIGRDIQQYYHYCLLFDLSTCLQNGLKLTEICALQKQLQQNTWLVTLVAQ
LEVVLASGQSLDAYLSRSAFFPQSLRLVLAKHNLTQQTTDEITMLANLQYTELQKQLQRKVSWLQPILFILIGLIIICTY
LSILLPLYQTMEGIS
Nucleotide
Download Length: 1008 bp
>NTDB_id=400406 GJ664_RS00765 WP_076648212.1 149521..150528(-) (comGB) [Latilactobacillus sakei strain CBA3614]
ATGTATAAGTTACGACAACAAGCGCAATTTTACGCTGATTTCTTGCAGTTATTGGGGCGGCTATTAGAGAACGGTTTTTC
ATTGCAACAAGCTTTTGCCTTCTTACCGATTGTCTTCCCAAAACAACGACAGTGGTTAAATCAGGTGAATCAAGCCCTTG
AAAAAGGCGACAGTCTAGCAGTCAGTTTAGCGCATGTTGATTTTCCAACTGATTATGTTGGTCAGATTGAACTAACCGAA
TTACAAGGTAATCTCGGGCAATGTTTATGGCATTTAGGTCAGATTCAAAGTATTCGGCAAAAGCGGCGCCGAGAAATTCG
GGGGGTGCTAGCTTATCCGTTATTTCTTTTGGCTTTTTTAGGGGGCTTAATCGGTTTATTACGCCATTATTTATTACCTG
AGATTGCCCAGATAACGCCCGAGTCAAACCAGACAGGCTCGCCGCTTAATCACGTCATATTGTGGGGCTTTTTGTTAGTG
CTGGTCCTTTTGATAATGGGCAGCGGTCTTTTTATGGTTTACCGCCGGTTACCGGTTTTAGTTCGATTACAAAAAGCGTT
CAAGTGGCCAATCATTGGGCGTGATATTCAGCAGTATTATCATTATTGTTTATTATTTGATTTGAGCACTTGTCTGCAAA
ACGGGCTCAAGTTAACAGAAATTTGTGCTTTACAGAAGCAACTGCAACAAAATACATGGCTGGTGACCTTGGTAGCACAA
TTGGAAGTCGTACTCGCTTCAGGGCAATCATTGGATGCTTATCTTAGTCGCTCTGCATTTTTTCCACAGTCGTTACGATT
GGTATTAGCTAAGCATAATCTCACGCAACAGACGACCGATGAGATCACCATGCTAGCTAACCTGCAGTATACGGAACTAC
AGAAGCAATTACAGCGGAAAGTGAGCTGGTTACAACCTATTTTATTTATCTTAATTGGGCTCATTATTATTTGTACGTAT
CTCAGTATTTTATTACCGCTGTATCAAACAATGGAGGGAATTTCATGA
ATGTATAAGTTACGACAACAAGCGCAATTTTACGCTGATTTCTTGCAGTTATTGGGGCGGCTATTAGAGAACGGTTTTTC
ATTGCAACAAGCTTTTGCCTTCTTACCGATTGTCTTCCCAAAACAACGACAGTGGTTAAATCAGGTGAATCAAGCCCTTG
AAAAAGGCGACAGTCTAGCAGTCAGTTTAGCGCATGTTGATTTTCCAACTGATTATGTTGGTCAGATTGAACTAACCGAA
TTACAAGGTAATCTCGGGCAATGTTTATGGCATTTAGGTCAGATTCAAAGTATTCGGCAAAAGCGGCGCCGAGAAATTCG
GGGGGTGCTAGCTTATCCGTTATTTCTTTTGGCTTTTTTAGGGGGCTTAATCGGTTTATTACGCCATTATTTATTACCTG
AGATTGCCCAGATAACGCCCGAGTCAAACCAGACAGGCTCGCCGCTTAATCACGTCATATTGTGGGGCTTTTTGTTAGTG
CTGGTCCTTTTGATAATGGGCAGCGGTCTTTTTATGGTTTACCGCCGGTTACCGGTTTTAGTTCGATTACAAAAAGCGTT
CAAGTGGCCAATCATTGGGCGTGATATTCAGCAGTATTATCATTATTGTTTATTATTTGATTTGAGCACTTGTCTGCAAA
ACGGGCTCAAGTTAACAGAAATTTGTGCTTTACAGAAGCAACTGCAACAAAATACATGGCTGGTGACCTTGGTAGCACAA
TTGGAAGTCGTACTCGCTTCAGGGCAATCATTGGATGCTTATCTTAGTCGCTCTGCATTTTTTCCACAGTCGTTACGATT
GGTATTAGCTAAGCATAATCTCACGCAACAGACGACCGATGAGATCACCATGCTAGCTAACCTGCAGTATACGGAACTAC
AGAAGCAATTACAGCGGAAAGTGAGCTGGTTACAACCTATTTTATTTATCTTAATTGGGCTCATTATTATTTGTACGTAT
CTCAGTATTTTATTACCGCTGTATCAAACAATGGAGGGAATTTCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Latilactobacillus sakei subsp. sakei 23K |
98.507 |
100 |
0.985 |