Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | HR116_RS11085 | Genome accession | NZ_CP054591 |
| Coordinates | 2387366..2387962 (+) | Length | 198 a.a. |
| NCBI ID | WP_003087237.1 | Uniprot ID | Q9I3H9 |
| Organism | Pseudomonas aeruginosa strain CDN118 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2382366..2392962
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR116_RS11060 | - | 2383294..2383671 (+) | 378 | WP_003083354.1 | hypothetical protein | - |
| HR116_RS11070 | - | 2383925..2384791 (-) | 867 | WP_079274736.1 | ABC transporter substrate-binding protein | - |
| HR116_RS11075 | dnaX | 2384828..2386915 (+) | 2088 | WP_034018924.1 | DNA polymerase III subunit gamma/tau | - |
| HR116_RS11080 | - | 2386961..2387287 (+) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| HR116_RS11085 | recR | 2387366..2387962 (+) | 597 | WP_003087237.1 | recombination mediator RecR | Machinery gene |
| HR116_RS11090 | - | 2388085..2389233 (+) | 1149 | WP_003103930.1 | acyl-CoA dehydrogenase family protein | - |
| HR116_RS11095 | - | 2389246..2389785 (-) | 540 | WP_003103931.1 | CbrC family protein | - |
| HR116_RS11100 | - | 2389859..2390746 (-) | 888 | WP_003103932.1 | SDR family oxidoreductase | - |
| HR116_RS11105 | - | 2390743..2392326 (-) | 1584 | WP_003121915.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| HR116_RS31835 | - | 2392449..2392616 (+) | 168 | Protein_2192 | TetR family transcriptional regulator | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21173.42 Da Isoelectric Point: 6.0063
>NTDB_id=400367 HR116_RS11085 WP_003087237.1 2387366..2387962(+) (recR) [Pseudomonas aeruginosa strain CDN118]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=400367 HR116_RS11085 WP_003087237.1 2387366..2387962(+) (recR) [Pseudomonas aeruginosa strain CDN118]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |