Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | GJU84_RS06200 | Genome accession | NZ_CP046028 |
| Coordinates | 1256539..1257513 (+) | Length | 324 a.a. |
| NCBI ID | WP_037573899.1 | Uniprot ID | A0AAE5T169 |
| Organism | Staphylococcus chromogenes strain 1401 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1251539..1262513
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJU84_RS06165 (GJU84_06105) | rpmG | 1251993..1252157 (+) | 165 | WP_255201399.1 | 50S ribosomal protein L33 | - |
| GJU84_RS06170 (GJU84_06110) | - | 1252353..1252892 (+) | 540 | WP_145400846.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| GJU84_RS06175 (GJU84_06115) | - | 1252910..1254349 (+) | 1440 | WP_145400847.1 | rhomboid family intramembrane serine protease | - |
| GJU84_RS06180 (GJU84_06120) | - | 1254351..1254554 (+) | 204 | WP_037573910.1 | YqgQ family protein | - |
| GJU84_RS06185 (GJU84_06125) | - | 1254551..1255537 (+) | 987 | WP_145400848.1 | ROK family glucokinase | - |
| GJU84_RS06190 (GJU84_06130) | - | 1255538..1255849 (+) | 312 | WP_145400849.1 | MTH1187 family thiamine-binding protein | - |
| GJU84_RS06195 (GJU84_06135) | - | 1255863..1256486 (+) | 624 | WP_145400850.1 | MBL fold metallo-hydrolase | - |
| GJU84_RS06200 (GJU84_06140) | comGA | 1256539..1257513 (+) | 975 | WP_037573899.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GJU84_RS06205 (GJU84_06145) | comGB | 1257482..1258549 (+) | 1068 | WP_145400851.1 | competence type IV pilus assembly protein ComGB | - |
| GJU84_RS06210 (GJU84_06150) | comGC | 1258564..1258881 (+) | 318 | WP_037573894.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GJU84_RS06215 (GJU84_06155) | comGD | 1258871..1259302 (+) | 432 | WP_165885688.1 | competence type IV pilus minor pilin ComGD | - |
| GJU84_RS06220 (GJU84_06160) | - | 1259495..1259980 (+) | 486 | WP_165885689.1 | competence type IV pilus minor pilin ComGF | - |
| GJU84_RS06225 (GJU84_06165) | - | 1260148..1260669 (+) | 522 | WP_186433790.1 | shikimate kinase | - |
| GJU84_RS06230 (GJU84_06170) | gcvT | 1260822..1261913 (+) | 1092 | WP_145400855.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37089.84 Da Isoelectric Point: 7.4356
>NTDB_id=400357 GJU84_RS06200 WP_037573899.1 1256539..1257513(+) (comGA) [Staphylococcus chromogenes strain 1401]
MQLLLDHVLQYAITHDASDVHFIPTASQVDVKLRIKDNLKTFDTLNLETYQRILTLLKFKSGLDVSSRHRAQSGRYIYEY
QELYYLRVSTLPLNLGTESCVIRITPQIFQTDKLQTTNDIRKIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEILNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDKQIAKEVTQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQSLNMIVNQRLITTKNNDRRLVYETMTSLDIQYFLNHNFTLPDSFKSLSEKLYDLQKEGEIDEQTLR
KYKK
MQLLLDHVLQYAITHDASDVHFIPTASQVDVKLRIKDNLKTFDTLNLETYQRILTLLKFKSGLDVSSRHRAQSGRYIYEY
QELYYLRVSTLPLNLGTESCVIRITPQIFQTDKLQTTNDIRKIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEILNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDKQIAKEVTQASLSGHLVLSTIHANDCQGVLL
RLIEMGITKQDLIQSLNMIVNQRLITTKNNDRRLVYETMTSLDIQYFLNHNFTLPDSFKSLSEKLYDLQKEGEIDEQTLR
KYKK
Nucleotide
Download Length: 975 bp
>NTDB_id=400357 GJU84_RS06200 WP_037573899.1 1256539..1257513(+) (comGA) [Staphylococcus chromogenes strain 1401]
ATGCAGTTATTATTAGACCATGTATTACAGTATGCCATAACCCATGACGCTTCAGATGTACACTTTATTCCAACCGCTTC
CCAAGTTGATGTAAAATTGAGGATAAAAGATAATTTAAAGACATTTGACACTCTGAATTTAGAGACATACCAAAGAATTT
TAACTTTACTCAAGTTCAAATCAGGTTTAGATGTTTCTTCACGCCATAGAGCTCAAAGTGGGCGATACATCTATGAGTAC
CAAGAATTGTATTATTTGCGTGTTTCTACATTACCACTAAACTTAGGTACTGAAAGTTGTGTAATAAGAATAACGCCGCA
AATATTTCAGACAGACAAACTTCAAACCACTAACGACATTCGTAAAATAATGGAGAAAAAACAAGGACTCATCTTATTTA
GTGGCCCAACAGGAGCTGGTAAAAGTACACTCATGTATCAAATGGTCGTTTATGCTAAAGAAATATTAAATTTAAATATT
ATTACTATAGAAGACCCTGTAGAGCAGCTCGTTAACGGTATTACTCAAATTTCTGTAAATGAAAAAGCAGACATCACATA
TGGTAGTTCTCTTAAAGCTATTTTACGTTGTGATCCTGACGTTATATTAATCGGGGAGATACGAGACAAACAAATTGCCA
AAGAAGTGACGCAAGCAAGTTTAAGTGGACATCTCGTCTTGTCAACGATTCATGCGAATGATTGTCAAGGTGTCTTATTA
AGACTCATTGAAATGGGCATTACCAAACAAGATCTAATACAATCATTAAATATGATCGTTAATCAAAGACTAATCACAAC
TAAAAACAACGATAGAAGATTAGTCTATGAAACCATGACAAGTTTAGACATTCAATACTTTCTCAACCACAATTTTACAT
TGCCAGATTCATTTAAAAGTTTAAGTGAAAAACTTTATGACTTACAAAAGGAAGGGGAGATTGATGAACAAACTTTACGA
AAGTATAAAAAATAA
ATGCAGTTATTATTAGACCATGTATTACAGTATGCCATAACCCATGACGCTTCAGATGTACACTTTATTCCAACCGCTTC
CCAAGTTGATGTAAAATTGAGGATAAAAGATAATTTAAAGACATTTGACACTCTGAATTTAGAGACATACCAAAGAATTT
TAACTTTACTCAAGTTCAAATCAGGTTTAGATGTTTCTTCACGCCATAGAGCTCAAAGTGGGCGATACATCTATGAGTAC
CAAGAATTGTATTATTTGCGTGTTTCTACATTACCACTAAACTTAGGTACTGAAAGTTGTGTAATAAGAATAACGCCGCA
AATATTTCAGACAGACAAACTTCAAACCACTAACGACATTCGTAAAATAATGGAGAAAAAACAAGGACTCATCTTATTTA
GTGGCCCAACAGGAGCTGGTAAAAGTACACTCATGTATCAAATGGTCGTTTATGCTAAAGAAATATTAAATTTAAATATT
ATTACTATAGAAGACCCTGTAGAGCAGCTCGTTAACGGTATTACTCAAATTTCTGTAAATGAAAAAGCAGACATCACATA
TGGTAGTTCTCTTAAAGCTATTTTACGTTGTGATCCTGACGTTATATTAATCGGGGAGATACGAGACAAACAAATTGCCA
AAGAAGTGACGCAAGCAAGTTTAAGTGGACATCTCGTCTTGTCAACGATTCATGCGAATGATTGTCAAGGTGTCTTATTA
AGACTCATTGAAATGGGCATTACCAAACAAGATCTAATACAATCATTAAATATGATCGTTAATCAAAGACTAATCACAAC
TAAAAACAACGATAGAAGATTAGTCTATGAAACCATGACAAGTTTAGACATTCAATACTTTCTCAACCACAATTTTACAT
TGCCAGATTCATTTAAAAGTTTAAGTGAAAAACTTTATGACTTACAAAAGGAAGGGGAGATTGATGAACAAACTTTACGA
AAGTATAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.204 |
99.691 |
0.58 |
| comGA | Staphylococcus aureus N315 |
58.204 |
99.691 |
0.58 |