Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   GJV52_RS01615 Genome accession   NZ_CP046027
Coordinates   291685..292110 (+) Length   141 a.a.
NCBI ID   WP_229439496.1    Uniprot ID   -
Organism   Neisseria brasiliensis strain N.177.16     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 286685..297110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJV52_RS01600 (GJV52_01600) - 287644..288864 (+) 1221 WP_095502673.1 aspartate kinase -
  GJV52_RS01605 (GJV52_01605) - 289207..290469 (-) 1263 WP_100563243.1 Glu/Leu/Phe/Val dehydrogenase -
  GJV52_RS01610 (GJV52_01610) - 290852..291571 (+) 720 WP_100563241.1 phosphoglycolate phosphatase -
  GJV52_RS01615 (GJV52_01615) recX 291685..292110 (+) 426 WP_229439496.1 recombination regulator RecX Regulator
  GJV52_RS13055 - 292184..292351 (+) 168 WP_095502669.1 hypothetical protein -
  GJV52_RS01620 (GJV52_01620) - 292427..293782 (-) 1356 WP_100563236.1 PFL family protein -
  GJV52_RS01625 (GJV52_01625) - 293798..294070 (-) 273 WP_095502667.1 ACT domain-containing protein -
  GJV52_RS01630 (GJV52_01630) alr 294284..295342 (-) 1059 WP_100563233.1 alanine racemase -
  GJV52_RS01635 (GJV52_01635) - 295538..296791 (-) 1254 WP_100563231.1 D-amino acid dehydrogenase -

Sequence

Protein


Download         Length: 141 a.a.        Molecular weight: 16556.59 Da        Isoelectric Point: 6.2642

>NTDB_id=400303 GJV52_RS01615 WP_229439496.1 291685..292110(+) (recX) [Neisseria brasiliensis strain N.177.16]
MDILSRQEISRVGLKRKLAPHAESEEELEKVLDESAERNWQSDERYAEAYIHSKSRQHGKLRLQQALAQQGIDADISREF
MPDKESELQTAIQVLRKKFKQPSRDLKEKQKQVRFLAYRGFDMGTIQAALKSDWAEDDEFY

Nucleotide


Download         Length: 426 bp        

>NTDB_id=400303 GJV52_RS01615 WP_229439496.1 291685..292110(+) (recX) [Neisseria brasiliensis strain N.177.16]
ATGGATATTTTATCGCGCCAAGAAATCAGCCGTGTCGGCCTCAAGCGCAAGCTCGCGCCGCATGCCGAAAGCGAAGAAGA
GTTGGAAAAAGTGTTGGACGAATCTGCCGAACGCAATTGGCAATCCGACGAACGCTACGCCGAAGCCTACATTCACAGCA
AAAGTCGCCAACACGGCAAATTGCGCTTGCAGCAGGCTTTGGCACAGCAAGGCATTGATGCCGATATCAGCCGCGAATTT
ATGCCGGATAAAGAAAGCGAACTGCAAACCGCGATTCAGGTTTTACGTAAAAAATTCAAGCAGCCCAGCCGTGATTTAAA
AGAGAAACAAAAGCAGGTACGCTTTCTCGCTTACCGCGGTTTCGACATGGGCACGATTCAAGCAGCCTTGAAAAGCGATT
GGGCAGAAGATGATGAATTTTATTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(19-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

74.82

98.582

0.738

Multiple sequence alignment