Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GH913_RS21075 Genome accession   NZ_CP046019
Coordinates   4864385..4864786 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas citri pv. malvacearum strain HD-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4859385..4869786
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GH913_RS21060 (GH913_21060) - 4861399..4863435 (-) 2037 WP_033836726.1 methyl-accepting chemotaxis protein -
  GH913_RS21065 (GH913_21065) - 4863475..4864005 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  GH913_RS21070 (GH913_21070) - 4864005..4864367 (-) 363 WP_005913708.1 response regulator -
  GH913_RS21075 (GH913_21075) pilG 4864385..4864786 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  GH913_RS21080 (GH913_21080) gshB 4865023..4865973 (+) 951 WP_033836727.1 glutathione synthase -
  GH913_RS21085 (GH913_21085) - 4865970..4866845 (+) 876 WP_005913700.1 TonB family protein -
  GH913_RS21090 (GH913_21090) - 4866919..4867836 (-) 918 WP_005913699.1 ADP-ribosylglycohydrolase family protein -
  GH913_RS21095 (GH913_21095) tsaB 4867833..4868552 (-) 720 WP_003482499.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=400211 GH913_RS21075 WP_005913706.1 4864385..4864786(-) (pilG) [Xanthomonas citri pv. malvacearum strain HD-1]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=400211 GH913_RS21075 WP_005913706.1 4864385..4864786(-) (pilG) [Xanthomonas citri pv. malvacearum strain HD-1]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGATGACTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment