Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FOC72_RS04345 Genome accession   NZ_CP054570
Coordinates   876534..876998 (+) Length   154 a.a.
NCBI ID   WP_002895418.1    Uniprot ID   -
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 871534..881998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS04320 (FOC72_04320) pyrF 872036..872728 (+) 693 WP_002895411.1 orotidine-5'-phosphate decarboxylase -
  FOC72_RS04325 (FOC72_04325) pyrE 872808..873437 (+) 630 WP_032914157.1 orotate phosphoribosyltransferase -
  FOC72_RS04330 (FOC72_04330) - 873549..875087 (+) 1539 WP_002895414.1 glycosyltransferase family 39 protein -
  FOC72_RS04335 (FOC72_04335) - 875084..875836 (+) 753 WP_002895415.1 DUF4336 domain-containing protein -
  FOC72_RS04340 (FOC72_04340) - 875872..876525 (+) 654 WP_002895416.1 uracil-DNA glycosylase -
  FOC72_RS04345 (FOC72_04345) mutX 876534..876998 (+) 465 WP_002895418.1 8-oxo-dGTP diphosphatase Machinery gene
  FOC72_RS04350 (FOC72_04350) - 877011..878279 (+) 1269 WP_032914305.1 dihydroorotase -
  FOC72_RS04355 (FOC72_04355) nt5e 878443..880599 (+) 2157 WP_002895421.1 cell surface ecto-5'-nucleotidase Nt5e -
  FOC72_RS04360 (FOC72_04360) plsY 880639..881289 (-) 651 WP_002895423.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17830.23 Da        Isoelectric Point: 4.3590

>NTDB_id=400151 FOC72_RS04345 WP_002895418.1 876534..876998(+) (mutX) [Streptococcus sanguinis strain FDAARGOS_770]
MVQLATICYIDNGREFLMLHRNKKPNDVHAGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPNLD
WYTYVFKVTEFEGELIDCNEGTLEWVPYDQVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=400151 FOC72_RS04345 WP_002895418.1 876534..876998(+) (mutX) [Streptococcus sanguinis strain FDAARGOS_770]
ATGGTTCAGTTAGCAACGATTTGTTATATCGATAATGGCCGAGAATTTCTCATGTTGCACCGCAACAAAAAGCCCAACGA
TGTTCATGCTGGGAAGTGGATTGGTGTCGGTGGCAAGCTAGAGCGAGGAGAAACCCCACAGGAATGCGCTGCGCGCGAGA
TTCTAGAGGAGACGGGCCTAAAGGCCAAGCCTGTTCTTAAAGGCGTTATCACTTTTCCTGAGTTTACTCCCAACTTGGAC
TGGTATACCTATGTTTTCAAGGTGACGGAGTTTGAGGGGGAACTGATTGACTGCAACGAAGGGACTTTGGAATGGGTGCC
CTATGATCAGGTTTTGTCTAAACCAACCTGGGAAGGCGATCATACTTTTGTTGAGTGGCTTTTAGAAGACAAGCCTTTCT
TTTCTGCAAAGTTTGTTTATGATGGAGATAAGCTGTTGGATACGCAGGTGGACTTTTACGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

94.156

100

0.942