Detailed information NTG0400052

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: GJS30_RS08490
• Genome accession: NZ_CP045993
• Coordinates: 1640820..1641104 (+)
• Length: 94 a.a.
• NCBI ID: WP_014417633.1
• Uniprot ID: I2C4H1
• Organism: Bacillus velezensis strain LABIM22
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1635820..1646104

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJS30_RS08470 (GJS30_08425)	-	1637065..1637973 (+)	909	WP_021493748.1	ketopantoate reductase family protein	-
GJS30_RS08475 (GJS30_08430)	-	1638002..1639234 (-)	1233	WP_007409644.1	aminopeptidase	-
GJS30_RS08480 (GJS30_08435)	-	1639335..1639469 (-)	135	WP_003154559.1	protein YkpC	-
GJS30_RS08485 (GJS30_08440)	mreBH	1639542..1640549 (-)	1008	WP_014417632.1	cell shape-determining protein MreBH	-
GJS30_RS08490 (GJS30_08445)	abrB	1640820..1641104 (+)	285	WP_014417633.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
GJS30_RS08495 (GJS30_08450)	-	1641277..1642581 (+)	1305	WP_014417634.1	ATP-binding protein	-
GJS30_RS08500 (GJS30_08455)	-	1642583..1643410 (+)	828	WP_014417635.1	gamma-glutamylcyclotransferase	-
GJS30_RS08505 (GJS30_08460)	ktrC	1643451..1644116 (+)	666	WP_003154554.1	Ktr system potassium transporter KtrC	-
GJS30_RS08510 (GJS30_08465)	ade	1644265..1645998 (+)	1734	WP_053285007.1	adenine deaminase	-

Sequence

Protein

• Length: 94 a.a.
• Molecular weight: 10516.38 Da
• Isoelectric Point: 5.8979

>NTDB_id=400052 GJS30_RS08490 WP_014417633.1 1640820..1641104(+) (abrB) [Bacillus velezensis strain LABIM22]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIVLKKYKPHGICLMTGEITSENQEYGNGKIILSPEGAK
MLLEEIEEALKGRS

Nucleotide

• Length: 285 bp

>NTDB_id=400052 GJS30_RS08490 WP_014417633.1 1640820..1641104(+) (abrB) [Bacillus velezensis strain LABIM22]
ATGAAATCAATTGGTGTAGTAAGAAAAGTAGACGAACTCGGGCGTATTGTCATGCCGATTGAATTGAGAAGAGCATTGGA
TATCGCTATTAAAGATAGTATTGAATTTTTCGTTGACGGAGACAAAATTGTCTTAAAAAAATACAAGCCGCACGGCATTT
GCTTAATGACGGGGGAAATTACCTCCGAAAATCAGGAGTACGGCAACGGCAAAATTATTTTAAGTCCTGAAGGAGCGAAA
ATGCTGCTTGAGGAAATCGAGGAAGCGTTAAAAGGTAGATCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (54-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: I2C4H1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	55.435	97.872	0.543