Detailed information NTG0400005

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HT750_RS15960
• Genome accession: NZ_CP054556
• Coordinates: 3303447..3304430 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196444.1
• Uniprot ID: -
• Organism: Escherichia coli strain LWY24
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3298447..3309430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HT750_RS15945 (HT750_15945)	dppA	3299747..3301354 (+)	1608	WP_061093023.1	dipeptide ABC transporter substrate-binding protein DppA	-
HT750_RS15950 (HT750_15950)	dppB	3301505..3302524 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HT750_RS15955 (HT750_15955)	dppC	3302534..3303436 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HT750_RS15960 (HT750_15960)	amiE	3303447..3304430 (+)	984	WP_001196444.1	dipeptide ABC transporter ATP-binding protein	Regulator
HT750_RS15965 (HT750_15965)	dppF	3304427..3305431 (+)	1005	WP_000103576.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HT750_RS15970 (HT750_15970)	yhjV	3305461..3306732 (-)	1272	WP_061093024.1	aromatic amino acid transport family protein	-
HT750_RS15975 (HT750_15975)	-	3307208..3307315 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HT750_RS15980 (HT750_15980)	-	3307691..3307798 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35830.37 Da
• Isoelectric Point: 6.5813

>NTDB_id=400005 HT750_RS15960 WP_001196444.1 3303447..3304430(+) (amiE) [Escherichia coli strain LWY24]
MALLNIDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=400005 HT750_RS15960 WP_001196444.1 3303447..3304430(+) (amiE) [Escherichia coli strain LWY24]
ATGGCGTTATTAAATATAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCCCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTACGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401