Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | GJD98_RS04690 | Genome accession | NZ_CP045974 |
| Coordinates | 1014704..1015252 (+) | Length | 182 a.a. |
| NCBI ID | WP_010946663.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain AUSMDU00010536 isolate SBT211 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1009704..1020252
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD98_RS04680 (GJD98_04680) | ravI | 1012209..1013219 (-) | 1011 | WP_010946661.1 | Dot/Icm T4SS effector RavI | - |
| GJD98_RS04685 (GJD98_04685) | pilM | 1013636..1014700 (+) | 1065 | WP_010946662.1 | type IV pilus assembly protein PilM | Machinery gene |
| GJD98_RS04690 (GJD98_04690) | pilN | 1014704..1015252 (+) | 549 | WP_010946663.1 | PilN domain-containing protein | Machinery gene |
| GJD98_RS04695 (GJD98_04695) | pilO | 1015266..1015865 (+) | 600 | WP_014841277.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GJD98_RS04700 (GJD98_04700) | pilP | 1015862..1016449 (+) | 588 | WP_010946665.1 | pilus assembly protein PilP | Machinery gene |
| GJD98_RS04705 (GJD98_04705) | pilQ | 1016453..1018549 (+) | 2097 | WP_010946666.1 | type IV pilus secretin PilQ | Machinery gene |
| GJD98_RS04710 (GJD98_04710) | aroK | 1018995..1019522 (+) | 528 | WP_010946667.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 182 a.a. Molecular weight: 21267.04 Da Isoelectric Point: 10.1404
>NTDB_id=399916 GJD98_RS04690 WP_010946663.1 1014704..1015252(+) (pilN) [Legionella pneumophila strain AUSMDU00010536 isolate SBT211]
MTEINLLPWREQKREQEKKLFTTMLLIGIIIAAAIVFLMNSYVSHLISNQMNRNQILQKEITALDEQIKEIKALKQIREG
LISRMSIVQNLQSTRTLMVHLFDELIKITPPGVYITKMQREHDVVTLWGYSESNTSISILMRNIEANVWIQNPVLTEIKK
NVEKKQSPNNEFKLSFVLKPKY
MTEINLLPWREQKREQEKKLFTTMLLIGIIIAAAIVFLMNSYVSHLISNQMNRNQILQKEITALDEQIKEIKALKQIREG
LISRMSIVQNLQSTRTLMVHLFDELIKITPPGVYITKMQREHDVVTLWGYSESNTSISILMRNIEANVWIQNPVLTEIKK
NVEKKQSPNNEFKLSFVLKPKY
Nucleotide
Download Length: 549 bp
>NTDB_id=399916 GJD98_RS04690 WP_010946663.1 1014704..1015252(+) (pilN) [Legionella pneumophila strain AUSMDU00010536 isolate SBT211]
ATGACTGAAATTAATTTATTGCCATGGCGTGAACAAAAACGTGAGCAGGAAAAGAAATTATTTACAACCATGCTATTGAT
AGGAATTATCATCGCTGCAGCAATTGTTTTTTTAATGAACTCTTATGTTTCTCATTTAATAAGTAATCAAATGAACCGAA
ATCAGATTTTACAAAAAGAAATTACAGCTTTAGATGAACAGATCAAGGAGATTAAAGCATTAAAACAAATCAGGGAAGGT
TTGATTTCAAGAATGTCGATTGTGCAGAATCTGCAGTCAACAAGAACTTTAATGGTTCACTTATTTGATGAATTAATAAA
AATTACTCCTCCAGGAGTTTACATAACCAAGATGCAAAGAGAACACGATGTAGTAACACTCTGGGGGTATTCCGAATCGA
ATACAAGTATTTCTATTTTGATGAGAAATATAGAGGCTAATGTCTGGATACAGAACCCTGTTCTAACTGAAATTAAAAAA
AATGTTGAAAAAAAACAGTCTCCAAACAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAAATATTAG
ATGACTGAAATTAATTTATTGCCATGGCGTGAACAAAAACGTGAGCAGGAAAAGAAATTATTTACAACCATGCTATTGAT
AGGAATTATCATCGCTGCAGCAATTGTTTTTTTAATGAACTCTTATGTTTCTCATTTAATAAGTAATCAAATGAACCGAA
ATCAGATTTTACAAAAAGAAATTACAGCTTTAGATGAACAGATCAAGGAGATTAAAGCATTAAAACAAATCAGGGAAGGT
TTGATTTCAAGAATGTCGATTGTGCAGAATCTGCAGTCAACAAGAACTTTAATGGTTCACTTATTTGATGAATTAATAAA
AATTACTCCTCCAGGAGTTTACATAACCAAGATGCAAAGAGAACACGATGTAGTAACACTCTGGGGGTATTCCGAATCGA
ATACAAGTATTTCTATTTTGATGAGAAATATAGAGGCTAATGTCTGGATACAGAACCCTGTTCTAACTGAAATTAAAAAA
AATGTTGAAAAAAAACAGTCTCCAAACAATGAATTTAAATTAAGTTTTGTGCTTAAACCCAAATATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
99.451 |
100 |
0.995 |