Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   HT132_RS00460 Genome accession   NZ_CP054479
Coordinates   63188..64270 (-) Length   360 a.a.
NCBI ID   WP_003156401.1    Uniprot ID   A0AAI8HS26
Organism   Bacillus amyloliquefaciens strain R8-25     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 58188..69270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HT132_RS00435 (HT132_00435) cysE 58287..58940 (-) 654 WP_014416745.1 serine O-acetyltransferase -
  HT132_RS00440 (HT132_00440) gltX 59251..60702 (-) 1452 WP_017419470.1 glutamate--tRNA ligase -
  HT132_RS00445 (HT132_00445) ispF 60794..61270 (-) 477 WP_003156407.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  HT132_RS00450 (HT132_00450) ispD 61263..61961 (-) 699 WP_053285121.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  HT132_RS00455 (HT132_00455) - 61974..63074 (-) 1101 WP_003156403.1 PIN/TRAM domain-containing protein -
  HT132_RS00460 (HT132_00460) disA 63188..64270 (-) 1083 WP_003156401.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  HT132_RS00465 (HT132_00465) radA/sms 64274..65653 (-) 1380 WP_014416742.1 DNA repair protein RadA Machinery gene
  HT132_RS00470 (HT132_00470) clpC 65747..68179 (-) 2433 WP_007410388.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  HT132_RS00475 (HT132_00475) - 68176..69267 (-) 1092 WP_003156398.1 protein arginine kinase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40671.21 Da        Isoelectric Point: 5.5321

>NTDB_id=399802 HT132_RS00460 WP_003156401.1 63188..64270(-) (disA) [Bacillus amyloliquefaciens strain R8-25]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATVEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=399802 HT132_RS00460 WP_003156401.1 63188..64270(-) (disA) [Bacillus amyloliquefaciens strain R8-25]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATTCTGCAGTTCGTTGCACCGGGCACCCCGCT
CAGAGCCGGGATAGAGAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAAGGTAAAGCAAG
TCGTCGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAAGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATTGCCATTTCTGAGCGCAGAAATG
TCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGGATTTATTTTAACAAAGGCAAATCAGGCCATT
CAAACGCTTGAGAAGTATAAAACCATTTTAGACAAAACGATTACGGCTTTAAACGCATTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCATCGGTATGAAATGGTGCTCCGAATAAAAAATGAAATCAATATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATGGAAGAAGAGGCGGCACTTTTC
ATCAAAGACTATGTCAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAACTTCAGGATATGTCCAGCTATGATCT
GCTTGATGATTCCATTCTGTTTAAGCTGCTTGGATATCCGGCCTCTACGAATCTTGATGATTATGTGCTCCCGAGAGGAT
ACAGGCTGCTGAACAAAATCCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCGTTCGGATTTTTGCCAAGC
ATAACGGAAGCCACAGTTGAAGAGCTTGATGATGTCGAAGGTATCGGCGAAGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTTCAGGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AAI8HS26

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.444

100

0.944