Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | GJE04_RS00535 | Genome accession | NZ_CP045961 |
| Coordinates | 110679..111278 (-) | Length | 199 a.a. |
| NCBI ID | WP_002221479.1 | Uniprot ID | A1KS89 |
| Organism | Neisseria meningitidis strain AUSMDU00010537 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 105679..116278
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJE04_RS00510 (GJE04_00510) | - | 105690..106202 (-) | 513 | WP_002214526.1 | shikimate kinase | - |
| GJE04_RS00520 (GJE04_00520) | pilQ | 107164..109449 (-) | 2286 | WP_002248535.1 | type IV pilus secretin PilQ | Machinery gene |
| GJE04_RS00525 (GJE04_00525) | pilP | 109468..110013 (-) | 546 | WP_002214522.1 | pilus assembly protein PilP | Machinery gene |
| GJE04_RS00530 (GJE04_00530) | - | 110031..110678 (-) | 648 | WP_002217908.1 | type 4a pilus biogenesis protein PilO | - |
| GJE04_RS00535 (GJE04_00535) | pilN | 110679..111278 (-) | 600 | WP_002221479.1 | PilN domain-containing protein | Machinery gene |
| GJE04_RS00540 (GJE04_00540) | pilM | 111281..112396 (-) | 1116 | WP_002214517.1 | type IV pilus biogenesis protein PilM | - |
| GJE04_RS00545 (GJE04_00545) | - | 112548..114944 (+) | 2397 | WP_002221477.1 | penicillin-binding protein 1A | - |
| GJE04_RS00550 (GJE04_00550) | yihA | 115065..115694 (-) | 630 | WP_002217904.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22243.45 Da Isoelectric Point: 9.5493
>NTDB_id=399732 GJE04_RS00535 WP_002221479.1 110679..111278(-) (pilN) [Neisseria meningitidis strain AUSMDU00010537]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKVEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKVEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=399732 GJE04_RS00535 WP_002221479.1 110679..111278(-) (pilN) [Neisseria meningitidis strain AUSMDU00010537]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAGTCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAGTCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
99.497 |
100 |
0.995 |