Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   GJE08_RS14185 Genome accession   NZ_CP045955
Coordinates   2883612..2884217 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica subsp. enterica serovar Enteritidis strain AUSMDU00010528     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 2878612..2889217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJE08_RS14170 (GJE08_14170) helD 2878829..2880883 (-) 2055 WP_154074526.1 DNA helicase IV -
  GJE08_RS14175 (GJE08_14175) - 2881007..2881453 (+) 447 WP_001617378.1 YccF domain-containing protein -
  GJE08_RS14180 (GJE08_14180) yccS 2881472..2883625 (+) 2154 WP_000950876.1 YccS family putative transporter -
  GJE08_RS14185 (GJE08_14185) sxy/tfoX 2883612..2884217 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  GJE08_RS14190 (GJE08_14190) sulA 2884434..2884943 (+) 510 WP_000288732.1 SOS-induced cell division inhibitor SulA -
  GJE08_RS14195 (GJE08_14195) ompA 2885300..2886352 (+) 1053 WP_001670727.1 porin OmpA -
  GJE08_RS14200 (GJE08_14200) matP 2886424..2886876 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  GJE08_RS14205 (GJE08_14205) - 2887062..2888822 (+) 1761 WP_000156448.1 AAA family ATPase -

Sequence


Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=399629 GJE08_RS14185 WP_001202375.1 2883612..2884217(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Enteritidis strain AUSMDU00010528]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=399629 GJE08_RS14185 WP_001202375.1 2883612..2884217(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Enteritidis strain AUSMDU00010528]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAGTGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTGCGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751


Multiple sequence alignment