Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   HTY60_RS06785 Genome accession   NZ_CP054415
Coordinates   1277066..1278226 (+) Length   386 a.a.
NCBI ID   WP_013351833.1    Uniprot ID   A0A9P1NH11
Organism   Bacillus amyloliquefaciens strain 205     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1272066..1283226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HTY60_RS06755 (HTY60_06755) - 1272812..1273999 (+) 1188 WP_013351829.1 putative glycoside hydrolase -
  HTY60_RS06760 (HTY60_06760) - 1274117..1274695 (+) 579 WP_013351830.1 GNAT family N-acetyltransferase -
  HTY60_RS06765 (HTY60_06765) spx 1274873..1275268 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  HTY60_RS06770 (HTY60_06770) - 1275326..1275982 (-) 657 WP_013351831.1 TerC family protein -
  HTY60_RS06775 (HTY60_06775) - 1276165..1276267 (+) 103 Protein_1302 hypothetical protein -
  HTY60_RS06780 (HTY60_06780) mecA 1276258..1276914 (+) 657 WP_014470612.1 adaptor protein MecA Regulator
  HTY60_RS06785 (HTY60_06785) coiA 1277066..1278226 (+) 1161 WP_013351833.1 competence protein CoiA family protein Machinery gene
  HTY60_RS06790 (HTY60_06790) pepF 1278455..1280284 (+) 1830 WP_013351834.1 oligoendopeptidase F Regulator
  HTY60_RS06795 (HTY60_06795) - 1280320..1280487 (-) 168 WP_003155026.1 hypothetical protein -
  HTY60_RS06800 (HTY60_06800) spxH 1280772..1281674 (-) 903 WP_013351835.1 protease adaptor protein SpxH -
  HTY60_RS06805 (HTY60_06805) - 1281671..1282069 (-) 399 WP_013351836.1 thiol management oxidoreductase -
  HTY60_RS06810 (HTY60_06810) - 1282294..1282980 (-) 687 WP_013351837.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 386 a.a.        Molecular weight: 44761.63 Da        Isoelectric Point: 9.7152

>NTDB_id=399464 HTY60_RS06785 WP_013351833.1 1277066..1278226(+) (coiA) [Bacillus amyloliquefaciens strain 205]
MFSALTAEGQLIQLAGSYSKEKAAELRKKRWFCPVCESELDIKLGREKLPHFAHKKSRLCPGESEPESEYHLEGKRQLFL
WLKTQGCAVSLEPYLPSARQRPDLTAESGTERLAFEFQCANLSADSLKSRTAGLKNAGYRPVWIIGAKRLKRLAAHFFRL
SAYHWQLFEVNSFSSLMFYCPDVRSFYKLHSITPFYTGYSYAGLTMIPLHKANLKDISLPEGRHSVNLSSWGRAVAGFRK
KSGRFLSEDAGLIRQLFYERHQIAFPFLPSEVFIPVSAGFVFASPVFVWQGHLYLRLAELCEKGAPIRLSGMVHYLRQKI
RRQEIRMRYDSHEDLIRMAIKQYADFLCLQDFLRETENEVYMPSTQHKRPQTAEELHRRDLLFFRE

Nucleotide


Download         Length: 1161 bp        

>NTDB_id=399464 HTY60_RS06785 WP_013351833.1 1277066..1278226(+) (coiA) [Bacillus amyloliquefaciens strain 205]
ATGTTCAGTGCTTTGACTGCCGAGGGACAGCTCATTCAGCTGGCCGGAAGCTATTCAAAAGAAAAAGCGGCGGAGCTGAG
AAAGAAACGCTGGTTCTGCCCCGTTTGTGAAAGTGAGCTTGATATTAAATTGGGACGGGAAAAACTGCCGCACTTCGCTC
ATAAAAAAAGCAGGCTGTGCCCGGGAGAATCCGAACCCGAAAGCGAATATCATCTGGAAGGAAAAAGACAGCTTTTTCTC
TGGCTTAAGACACAAGGTTGCGCCGTCAGCCTAGAGCCGTATCTGCCTTCCGCCCGACAGCGGCCTGATCTGACGGCGGA
AAGCGGCACAGAGCGGCTGGCTTTTGAATTTCAATGTGCAAACCTTTCGGCAGATTCTTTAAAGAGCCGGACGGCCGGCT
TGAAAAACGCCGGGTATCGGCCTGTCTGGATCATCGGAGCAAAACGCTTAAAACGGCTGGCTGCGCATTTTTTCCGGCTT
TCTGCTTATCACTGGCAATTATTTGAAGTTAACTCATTTTCCTCCTTGATGTTTTACTGCCCCGATGTCCGCTCCTTTTA
TAAGCTTCATTCCATCACCCCGTTTTACACCGGCTATTCTTATGCCGGCTTAACCATGATCCCTCTTCATAAAGCAAACC
TGAAAGACATTTCTCTCCCGGAGGGCCGGCACAGCGTCAACCTTTCCTCTTGGGGACGCGCCGTAGCAGGCTTCCGCAAA
AAAAGCGGCCGGTTTTTATCTGAAGATGCAGGTCTTATCCGGCAACTTTTTTACGAACGGCATCAGATTGCCTTTCCTTT
TCTGCCTTCTGAAGTGTTTATCCCCGTTTCAGCGGGCTTTGTGTTTGCAAGTCCCGTTTTTGTGTGGCAGGGCCATTTAT
ACTTGCGGCTTGCGGAGCTTTGTGAAAAAGGCGCACCGATCCGGTTATCCGGCATGGTTCATTATTTGCGGCAAAAAATC
CGGCGGCAGGAGATCAGGATGCGGTATGATTCACATGAAGATCTCATCAGAATGGCGATAAAACAATATGCTGATTTCTT
ATGTTTGCAGGATTTTTTAAGGGAAACTGAGAATGAAGTATATATGCCTTCAACCCAACACAAGCGCCCTCAAACGGCCG
AAGAGCTGCACCGCCGGGACCTGCTCTTTTTTAGGGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9P1NH11

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

44.947

97.409

0.438