Detailed information NTG0399441

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: HTY60_RS02685
• Genome accession: NZ_CP054415
• Coordinates: 510570..511745 (+)
• Length: 391 a.a.
• NCBI ID: WP_065118507.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain 205
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 505570..516745

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HTY60_RS02655 (HTY60_02655)	-	505793..506299 (+)	507	WP_174201897.1	hypothetical protein	-
HTY60_RS02660 (HTY60_02660)	-	506361..506741 (+)	381	WP_065118514.1	cystatin-like fold lipoprotein	-
HTY60_RS02665 (HTY60_02665)	-	506830..507555 (+)	726	WP_065118503.1	hypothetical protein	-
HTY60_RS02670 (HTY60_02670)	-	508002..508265 (-)	264	WP_065118504.1	hypothetical protein	-
HTY60_RS02675 (HTY60_02675)	-	508277..509026 (-)	750	WP_065118505.1	PmeII family type II restriction endonuclease	-
HTY60_RS02680 (HTY60_02680)	-	509078..510208 (-)	1131	WP_065118506.1	DNA cytosine methyltransferase	-
HTY60_RS02685 (HTY60_02685)	rapC	510570..511745 (+)	1176	WP_065118507.1	Rap family tetratricopeptide repeat protein	Regulator
HTY60_RS02690 (HTY60_02690)	-	512028..512486 (-)	459	WP_065118508.1	SMI1/KNR4 family protein	-
HTY60_RS02695 (HTY60_02695)	-	512499..514295 (-)	1797	WP_065118509.1	T7SS effector LXG polymorphic toxin	-
HTY60_RS02705 (HTY60_02705)	-	515036..515473 (+)	438	WP_013351105.1	hypothetical protein	-
HTY60_RS02710 (HTY60_02710)	-	515594..516097 (-)	504	WP_013351106.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 46366.73 Da
• Isoelectric Point: 4.6626

>NTDB_id=399441 HTY60_RS02685 WP_065118507.1 510570..511745(+) (rapC) [Bacillus amyloliquefaciens strain 205]
MQQGFLKRSKIPYDLVTKKLNAWYMAIKSDLVEEAERIKVEAEAELANMEENQDALLYYQLLEFRHEIMLSYMKSKNMDS
LENAYETLREIESQGQLTGMLEYYFYFFMGMYEFRRKELTTAISAYRIAEKKLFEVEDEIERAEFFFKVAHVYYYMKQTY
FSLNYANRALKIFKQYDAYAVQTIRCQNIIAGNLIDSLDYERALDVFRDTLRIAESVGADYLIGMSRMNIGICYDYIGEY
DKAAEYLQTSLEFFEKTEHVFLTKTLFNIVNVKTKQEALAEALLYLKKGQSVAKKYGDSEYEAKFKIIEGLYFSDDEYSL
IEEAFSYLNEKRMFGDIENFAIRVADYFYEEGDLSRSNEYYRLSIEARRKIKKGEIINEDQPDFVYSHFIG

Nucleotide

• Length: 1176 bp

>NTDB_id=399441 HTY60_RS02685 WP_065118507.1 510570..511745(+) (rapC) [Bacillus amyloliquefaciens strain 205]
TTGCAGCAGGGTTTTTTAAAGAGAAGCAAAATTCCATATGATTTGGTGACAAAAAAACTAAATGCTTGGTACATGGCGAT
AAAGAGTGATTTGGTTGAGGAAGCAGAACGAATTAAAGTGGAAGCTGAAGCTGAACTAGCTAATATGGAAGAAAATCAAG
ATGCTCTATTATATTATCAGCTGCTAGAATTCAGACATGAAATCATGTTGAGCTATATGAAGTCAAAGAATATGGATAGC
TTGGAAAATGCATATGAGACGCTAAGGGAAATTGAATCCCAAGGTCAATTAACCGGTATGTTGGAGTATTATTTTTATTT
CTTTATGGGAATGTATGAATTTAGAAGGAAAGAACTGACTACAGCAATAAGTGCTTATCGAATCGCGGAGAAAAAGTTGT
TTGAGGTGGAAGATGAAATTGAAAGGGCGGAGTTCTTCTTCAAAGTCGCCCATGTGTATTACTATATGAAACAAACTTAT
TTTTCTTTAAATTATGCCAATCGGGCGCTTAAAATTTTCAAACAGTACGATGCGTATGCAGTTCAAACCATAAGATGTCA
AAATATAATTGCTGGTAATTTAATTGACTCTTTGGATTATGAAAGAGCACTAGATGTGTTTAGAGACACATTGCGTATAG
CTGAATCAGTTGGAGCGGATTACTTGATTGGTATGTCTCGAATGAATATTGGTATTTGTTATGATTATATAGGTGAATAT
GATAAAGCAGCTGAGTATTTACAAACGTCATTAGAATTTTTCGAAAAGACTGAACACGTCTTTTTGACAAAAACATTGTT
CAATATTGTAAATGTTAAAACGAAACAAGAAGCTCTGGCTGAAGCCTTACTTTATTTAAAAAAGGGGCAATCTGTCGCAA
AGAAATACGGAGATTCAGAATATGAAGCAAAGTTTAAGATTATAGAAGGACTTTATTTTAGTGATGATGAATATTCTTTA
ATTGAAGAGGCCTTTTCGTATCTGAATGAAAAAAGAATGTTCGGAGACATTGAAAATTTTGCAATTAGAGTAGCGGATTA
TTTTTATGAAGAAGGGGATTTATCACGTTCCAATGAGTATTATCGACTGAGTATTGAAGCGAGACGAAAAATAAAAAAAG
GGGAGATTATTAATGAAGATCAGCCGGACTTTGTTTACAGTCATTTTATTGGGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (10-70)

• Tetratricopeptide repeat (TPR_12) (199-256)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	38.4	95.908	0.368