Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   GJE17_RS05865 Genome accession   NZ_CP045930
Coordinates   1167529..1168566 (-) Length   345 a.a.
NCBI ID   WP_010922499.1    Uniprot ID   A0A4U9I5V9
Organism   Streptococcus pyogenes strain AUSMDU00010539     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1162529..1173566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GJE17_RS05845 (GJE17_05845) - 1163271..1163897 (+) 627 WP_002983834.1 prepilin peptidase -
  GJE17_RS05850 (GJE17_05850) rlmN 1163979..1165058 (-) 1080 WP_031488529.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  GJE17_RS05855 (GJE17_05855) - 1165062..1165682 (-) 621 WP_002992791.1 YutD family protein -
  GJE17_RS05860 (GJE17_05860) - 1166130..1167107 (-) 978 WP_031577505.1 LacI family DNA-binding transcriptional regulator -
  GJE17_RS05865 (GJE17_05865) sepM 1167529..1168566 (-) 1038 WP_010922499.1 SepM family pheromone-processing serine protease Regulator
  GJE17_RS05870 (GJE17_05870) coaD 1168553..1169044 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  GJE17_RS05875 (GJE17_05875) rsmD 1169034..1169573 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  GJE17_RS05880 (GJE17_05880) asnA 1169696..1170688 (-) 993 WP_002983817.1 aspartate--ammonia ligase -
  GJE17_RS05885 (GJE17_05885) arcC 1171001..1171951 (-) 951 WP_010922501.1 carbamate kinase -
  GJE17_RS05890 (GJE17_05890) - 1171971..1173302 (-) 1332 WP_030126384.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37541.24 Da        Isoelectric Point: 9.6692

>NTDB_id=399367 GJE17_RS05865 WP_010922499.1 1167529..1168566(-) (sepM) [Streptococcus pyogenes strain AUSMDU00010539]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=399367 GJE17_RS05865 WP_010922499.1 1167529..1168566(-) (sepM) [Streptococcus pyogenes strain AUSMDU00010539]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTATTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCGCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTCTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4U9I5V9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693


Multiple sequence alignment