Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   GI367_RS03150 Genome accession   NZ_CP045926
Coordinates   602660..603124 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain AL7     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 597660..608124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GI367_RS03135 (GI367_03135) - 598141..599961 (+) 1821 WP_029325882.1 PAS domain-containing protein -
  GI367_RS03140 (GI367_03140) - 599942..601155 (-) 1214 Protein_615 aminotransferase A -
  GI367_RS19085 - 601356..601517 (-) 162 WP_007409608.1 hypothetical protein -
  GI367_RS03145 (GI367_03145) cheV 601706..602617 (+) 912 WP_007611092.1 chemotaxis protein CheV -
  GI367_RS03150 (GI367_03150) kre 602660..603124 (-) 465 WP_003154622.1 YkyB family protein Regulator
  GI367_RS03155 (GI367_03155) - 603247..604539 (-) 1293 WP_007611093.1 MFS transporter -
  GI367_RS03160 (GI367_03160) - 604615..605109 (-) 495 WP_087920795.1 L,D-transpeptidase family protein -
  GI367_RS03165 (GI367_03165) - 605184..606047 (-) 864 WP_007611096.1 metallophosphoesterase -
  GI367_RS03170 (GI367_03170) fadH 606191..606955 (+) 765 WP_029325883.1 2,4-dienoyl-CoA reductase -
  GI367_RS19215 - 607069..607615 (+) 547 Protein_623 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=399235 GI367_RS03150 WP_003154622.1 602660..603124(-) (kre) [Bacillus velezensis strain AL7]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=399235 GI367_RS03150 WP_003154622.1 602660..603124(-) (kre) [Bacillus velezensis strain AL7]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAATGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment