Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | DEIPR_RS01385 | Genome accession | NC_015161 |
| Coordinates | 279151..279546 (+) | Length | 131 a.a. |
| NCBI ID | WP_013614042.1 | Uniprot ID | F0RJ25 |
| Organism | Deinococcus proteolyticus MRP | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 274151..284546
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DEIPR_RS01355 (Deipr_0253) | - | 274887..275291 (+) | 405 | WP_013614035.1 | hypothetical protein | - |
| DEIPR_RS01360 (Deipr_0254) | - | 275356..275886 (-) | 531 | WP_245532706.1 | DUF3809 domain-containing protein | - |
| DEIPR_RS01365 (Deipr_0255) | - | 275906..276169 (-) | 264 | WP_013614037.1 | DUF3248 domain-containing protein | - |
| DEIPR_RS01370 (Deipr_0256) | purD | 276166..277449 (-) | 1284 | WP_013614038.1 | phosphoribosylamine--glycine ligase | - |
| DEIPR_RS01375 (Deipr_0257) | - | 277450..278364 (-) | 915 | WP_013614039.1 | MBL fold metallo-hydrolase | - |
| DEIPR_RS14110 (Deipr_0258) | - | 278383..278556 (-) | 174 | WP_013614040.1 | hypothetical protein | - |
| DEIPR_RS01380 (Deipr_0259) | cdd | 278590..279036 (-) | 447 | WP_013614041.1 | cytidine deaminase | - |
| DEIPR_RS01385 (Deipr_0260) | comEA | 279151..279546 (+) | 396 | WP_013614042.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| DEIPR_RS01390 (Deipr_0261) | comEC | 279539..281842 (+) | 2304 | WP_245532707.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| DEIPR_RS01395 (Deipr_0262) | - | 281856..282872 (-) | 1017 | WP_013614044.1 | M20/M25/M40 family metallo-hydrolase | - |
| DEIPR_RS01400 (Deipr_0263) | mutY | 283017..284048 (-) | 1032 | WP_041222205.1 | A/G-specific adenine glycosylase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13634.82 Da Isoelectric Point: 4.8004
>NTDB_id=39908 DEIPR_RS01385 WP_013614042.1 279151..279546(+) (comEA) [Deinococcus proteolyticus MRP]
MNGGREEQVWTAALAAGVLLLGALTLWPLLFPAPRAPQVLRAGAVPLTVTQRTGEAAPDYPATASVEPLISGRLDLNTAT
RAQLEALPEVGPALAARIEAARPLRSLADLDAVKGIGPAALEQLTPLVKFE
MNGGREEQVWTAALAAGVLLLGALTLWPLLFPAPRAPQVLRAGAVPLTVTQRTGEAAPDYPATASVEPLISGRLDLNTAT
RAQLEALPEVGPALAARIEAARPLRSLADLDAVKGIGPAALEQLTPLVKFE
Nucleotide
Download Length: 396 bp
>NTDB_id=39908 DEIPR_RS01385 WP_013614042.1 279151..279546(+) (comEA) [Deinococcus proteolyticus MRP]
GTGAACGGGGGACGTGAGGAGCAGGTCTGGACCGCCGCGCTGGCTGCCGGTGTGCTGCTGCTGGGTGCGCTGACGCTGTG
GCCGCTGCTGTTCCCGGCCCCGCGTGCGCCGCAGGTGCTGCGGGCTGGCGCTGTCCCACTGACGGTCACGCAGCGCACCG
GCGAGGCGGCTCCGGACTACCCGGCTACCGCCAGCGTGGAGCCGCTGATTTCGGGGCGGCTGGACCTGAACACCGCCACC
CGCGCCCAGCTGGAAGCCCTGCCGGAAGTCGGCCCGGCGCTGGCGGCGCGGATAGAGGCGGCCCGTCCCCTGCGCTCGCT
GGCCGACCTGGACGCGGTGAAGGGCATCGGCCCGGCGGCGCTGGAGCAGCTGACGCCGCTGGTGAAGTTTGAGTAG
GTGAACGGGGGACGTGAGGAGCAGGTCTGGACCGCCGCGCTGGCTGCCGGTGTGCTGCTGCTGGGTGCGCTGACGCTGTG
GCCGCTGCTGTTCCCGGCCCCGCGTGCGCCGCAGGTGCTGCGGGCTGGCGCTGTCCCACTGACGGTCACGCAGCGCACCG
GCGAGGCGGCTCCGGACTACCCGGCTACCGCCAGCGTGGAGCCGCTGATTTCGGGGCGGCTGGACCTGAACACCGCCACC
CGCGCCCAGCTGGAAGCCCTGCCGGAAGTCGGCCCGGCGCTGGCGGCGCGGATAGAGGCGGCCCGTCCCCTGCGCTCGCT
GGCCGACCTGGACGCGGTGAAGGGCATCGGCCCGGCGGCGCTGGAGCAGCTGACGCCGCTGGTGAAGTTTGAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
57.937 |
96.183 |
0.557 |