Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | GIY05_RS26170 | Genome accession | NZ_CP045916 |
| Coordinates | 5593581..5594138 (+) | Length | 185 a.a. |
| NCBI ID | WP_003102600.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain CF39S | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5588581..5599138
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GIY05_RS26150 | pilR | 5589857..5591194 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| GIY05_RS26155 | thiO | 5591240..5592334 (-) | 1095 | WP_020750388.1 | glycine oxidase ThiO | - |
| GIY05_RS26160 | - | 5592469..5592978 (+) | 510 | WP_003102595.1 | Tfp pilus assembly protein FimT/FimU | - |
| GIY05_RS26165 | - | 5593084..5593590 (+) | 507 | WP_003102598.1 | Tfp pilus assembly protein FimT/FimU | - |
| GIY05_RS26170 | pilV | 5593581..5594138 (+) | 558 | WP_003102600.1 | type 4a pilus minor pilin PilV | Machinery gene |
| GIY05_RS26175 | pilW | 5594135..5594959 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| GIY05_RS26180 | pilX | 5594956..5595543 (+) | 588 | WP_003102605.1 | type 4a pilus minor pilin PilX | - |
| GIY05_RS26185 | pilY1 | 5595555..5599046 (+) | 3492 | WP_003102607.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20047.13 Da Isoelectric Point: 8.2254
>NTDB_id=399061 GIY05_RS26170 WP_003102600.1 5593581..5594138(+) (pilV) [Pseudomonas aeruginosa strain CF39S]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVDRNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVDRNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=399061 GIY05_RS26170 WP_003102600.1 5593581..5594138(+) (pilV) [Pseudomonas aeruginosa strain CF39S]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGATCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGATCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |