Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GI584_RS09155 Genome accession   NZ_CP045915
Coordinates   1991688..1992641 (+) Length   317 a.a.
NCBI ID   WP_100360974.1    Uniprot ID   A0A5Q2TLM1
Organism   Gracilibacillus salitolerans strain SCU50     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1986688..1997641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GI584_RS09135 (GI584_09135) - 1986900..1988153 (+) 1254 WP_153791045.1 NlpC/P60 family protein -
  GI584_RS09140 (GI584_09140) - 1988514..1988942 (-) 429 WP_325063428.1 BrxA/BrxB family bacilliredoxin -
  GI584_RS09145 (GI584_09145) pabB 1989160..1990887 (-) 1728 WP_153791047.1 aminodeoxychorismate synthase component I -
  GI584_RS09150 (GI584_09150) - 1990888..1991466 (-) 579 WP_100360975.1 aminodeoxychorismate/anthranilate synthase component II -
  GI584_RS09155 (GI584_09155) ceuB 1991688..1992641 (+) 954 WP_100360974.1 ABC transporter permease Machinery gene
  GI584_RS09160 (GI584_09160) - 1992631..1993578 (+) 948 WP_153791048.1 iron chelate uptake ABC transporter family permease subunit -
  GI584_RS09165 (GI584_09165) - 1993572..1994330 (+) 759 WP_100360972.1 ABC transporter ATP-binding protein -
  GI584_RS09170 (GI584_09170) - 1994454..1995452 (+) 999 WP_100360971.1 siderophore ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35061.48 Da        Isoelectric Point: 10.0540

>NTDB_id=399008 GI584_RS09155 WP_100360974.1 1991688..1992641(+) (ceuB) [Gracilibacillus salitolerans strain SCU50]
MKKRYLIVLLVILSLVSLFIGVIELNPKDLLQLTEDQKEILLISRFPRLMSIIIAGMSMSICGLIMQQLSRNKFVSPTTA
GTMDSARFGILVALMIFPSAGPIEKMVVAFTFALIGTFIFMKILEKVKFKDPIFIPLVGLMFGNIVSSITTFFAYKNDLI
QNMSSWLQGNFALILQGRYEMLYISVPLVIFAYIYANKFTIAGMGEDFSKNLGMNHKRVVNVGLVIVAIITSVVILTVGM
IPFLGLIIPNIVSIYRGDHLKNSLPHTALLGAVFVLACDILGRIIIFPYEIAIGVTVGVIGSGIFLYLIMRRSAYAS

Nucleotide


Download         Length: 954 bp        

>NTDB_id=399008 GI584_RS09155 WP_100360974.1 1991688..1992641(+) (ceuB) [Gracilibacillus salitolerans strain SCU50]
ATGAAGAAGCGATATTTAATTGTATTACTAGTTATTTTATCTCTAGTCTCATTATTTATTGGGGTGATCGAATTAAATCC
AAAGGATTTACTCCAACTAACAGAAGATCAAAAAGAGATTTTACTTATCAGTAGGTTTCCGCGTTTAATGAGTATCATCA
TTGCGGGAATGAGCATGAGTATATGTGGCTTAATCATGCAACAACTAAGCCGGAACAAATTTGTCTCACCGACAACAGCA
GGTACAATGGATTCTGCACGATTTGGTATTTTAGTAGCTTTAATGATATTTCCTTCTGCAGGTCCAATTGAGAAAATGGT
AGTGGCATTTACGTTTGCGTTGATAGGAACCTTTATCTTTATGAAAATACTAGAAAAAGTTAAATTTAAGGATCCTATTT
TCATCCCATTAGTTGGATTGATGTTTGGGAATATTGTTAGTTCGATTACAACATTTTTTGCTTATAAAAATGATCTGATT
CAGAATATGTCTTCCTGGCTCCAAGGAAACTTCGCTCTCATTCTACAAGGACGATATGAAATGTTATACATAAGTGTGCC
TTTAGTGATTTTTGCTTATATCTATGCAAATAAATTTACGATAGCAGGTATGGGGGAAGATTTTTCCAAGAATTTGGGGA
TGAATCATAAACGAGTAGTCAATGTGGGACTGGTAATTGTAGCGATTATAACTTCTGTCGTCATACTGACAGTAGGCATG
ATCCCGTTCTTAGGCTTAATTATTCCGAATATTGTTTCTATCTATCGGGGAGACCATTTAAAAAATAGCTTGCCACATAC
AGCATTATTAGGAGCTGTATTTGTATTAGCTTGTGACATTTTAGGAAGAATTATCATATTCCCGTATGAAATTGCCATTG
GTGTAACAGTTGGTGTTATTGGTAGTGGGATCTTCCTTTACTTAATCATGAGGAGATCTGCATATGCGTCTTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Q2TLM1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

56.55

98.738

0.558

Multiple sequence alignment