Detailed information NTG0398755

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: APZ19_RS03225
• Genome accession: NZ_CP045859
• Coordinates: 660669..664055 (-)
• Length: 1128 a.a.
• NCBI ID: WP_054823985.1
• Uniprot ID: A0AAP9G9U2
• Organism: Vibrio owensii strain SH14
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 655669..669055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APZ19_RS03210 (APZ19_03210)	-	655965..656990 (-)	1026	WP_005439412.1	ABC transporter permease	-
APZ19_RS03215 (APZ19_03215)	-	656993..657979 (-)	987	WP_005425282.1	ABC transporter permease	-
APZ19_RS03220 (APZ19_03220)	-	658150..659832 (-)	1683	WP_020196582.1	ABC transporter substrate-binding protein	-
APZ19_RS03225 (APZ19_03225)	chiS	660669..664055 (-)	3387	WP_054823985.1	response regulator	Regulator
APZ19_RS03230 (APZ19_03230)	rsmC	664284..665309 (-)	1026	WP_054823984.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
APZ19_RS03235 (APZ19_03235)	-	665386..666471 (-)	1086	WP_009707537.1	AI-2E family transporter	-
APZ19_RS03240 (APZ19_03240)	hemL	666830..668125 (-)	1296	WP_054823983.1	glutamate-1-semialdehyde 2,1-aminomutase	-
APZ19_RS03245 (APZ19_03245)	erpA	668372..668713 (+)	342	WP_005439421.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127382.23 Da
• Isoelectric Point: 5.5013

>NTDB_id=398755 APZ19_RS03225 WP_054823985.1 660669..664055(-) (chiS) [Vibrio owensii strain SH14]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQHRYIKGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGRYKETALGRTFKRLSEDVSARRKVNEDYTPVVVSDFDIENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIETLLVGSDHKPRTINTKQEDIQNSLEIVDKALAGDTEVGTYSNRLGEE
MIAAFAPIETRGLTWALVVQLPEKEAFARVHQLEKLFVIAMLIAIVLVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTERKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSGHLLGNKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISAMVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQATQSLAARGHFQIPEANFENNDDLSLPENPN
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPETLALIEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLTKPFNKQELAARIQAHLTASKAEMRHIENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSCYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELLREVLVDTMTHA
LEYWESVTGETKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KMQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=398755 APZ19_RS03225 WP_054823985.1 660669..664055(-) (chiS) [Vibrio owensii strain SH14]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCATTTTTGGTTCTTAGTATTAC
GCCCCTGACGATCACTGCGATTTTCTTCCTGCAATCACACAGTAAAGATCTCCAAGAGCAGAGTACATCGCATCTACTCT
CTGTTCGTGATACTAAGCAGCAGCAGATCATTGACTACTTCGCTGCGCAAGAAACGGAAGTGATGGGCTTCGTACGCTCA
GAACTTGCCTATGCCAGTGGCGGACGCTTCTACGGCTTGGTCAACGCATTTAGCCGTTTAGGGCACGATATTGACGAAGC
GAGAGAAAACGCACAGCACCGCTACATCAAAGGCAGTGGCGATCAAATCAAAACGTCGATTTTGCCGGAGTCGTCCAATT
ATGTTGGTAGCGAACGCTACCGCCTACTCCACAAACGCTACCATTGGGCGTACCTAGAACTGCTAAAACGTTCTGATTTC
AATGATATTTTGTTGGTCGACATTGACGGTAATGTCACGTACTCCATCAATAAAGATGACAACTACGGCACAAACCTACT
AACCGGTCGCTATAAAGAGACGGCGTTGGGTCGTACCTTTAAACGTTTATCAGAAGACGTCAGTGCACGCCGAAAAGTCA
ATGAAGATTACACCCCAGTGGTCGTGTCTGACTTTGATATCGAAAACGGAAAGCAAGTCGCTTGGTTAGGTGCGCCTATT
GTTCAACAAGGCTACCTCCACAGTTACGCTATGTTCCGTTTGCCAAATAACGGTATTACTAAGCTTATTGCGGAAATTAA
CCGCGATTCATCCATTGAAACCTTGCTCGTTGGTAGTGACCACAAACCTAGAACGATCAATACCAAACAAGAAGATATCC
AAAATAGCTTAGAAATCGTGGATAAAGCGTTGGCCGGTGACACAGAAGTAGGTACTTACAGTAACCGCTTAGGTGAAGAG
ATGATTGCGGCGTTTGCGCCAATTGAAACTCGTGGCCTAACTTGGGCGCTAGTCGTGCAACTTCCTGAAAAAGAAGCCTT
TGCACGTGTCCACCAGCTTGAAAAACTGTTTGTGATTGCGATGTTAATTGCGATTGTATTGGTAGTTATCGCCTCACATT
ACTTATCGAACTTCATCACTTCACCACTGCTTAAACTGACTTGGGCAGCAGAGAAAGTGTCTGCAGGCGATTTGGATGAA
ACGACCTTTAACACCGAACGAAAAGACGAGATTGGGCGTCTTGCGATCAGCTTCGAGCGCATGCAACGCTCTATTCGTGA
AAAGATTCAAACCATCAAGCAGCAAAATGAAGAGTTAGAAAGCAACATCAAGCTGATCCAAAAGCAAAACGAAGAATTAC
AGCTGGCTGATAAGCTGAAAGATGAGTTCCTTGCGACAACCTCCCATGAACTTCGCACGCCATTACACGGTATGGTTGGT
ATTGCAGAAACCTTGGTATCTGGCGCAAATGGGGCTATTCCGGCTAGCCAGAAATATCAATTGGACATCATCATCAAGAG
TGGTCAACGCCTAGCGAACCTCGTTGATGACTTATTGGATTACCACAAGATGCGCTATGGCAGCATGGATATCCAAAAGT
CAGCAGTGAGTTTAGCCAGTGCCACACGCTTAGTATTAGAGCTTTCCGGTCACCTATTGGGTAACAAGACTATCCGCATC
ATTAACCAAGTGCCTGCGGATTTGAAAGCCGTCTCAGCGGATCCTCAGCGCTTAGAACAAGTGCTGTACAATTTGATCGG
TAATGCCATCAAGTACACCTCTGAAGGTAAGATCGTCATTTCAGCAATGGTTGTTGACGATCAAGTACGAGTGCAAGTCG
TGGATACAGGTCAAGGCATCCCGGCTGAGCATCTAGAACATATCTTCGAACCTCTGATTCAAGCAGGTCAAGACGCGAGT
CGCTACCGTCAAGGTGCGGGATTGGGTCTATCAATCAGCCGTCAACTTATTGAGTTGATGGGTGGGTCATTGTATGTGAG
CAGTCAACCTATGGTCGGCACCACATTCAGCTTTACCCTGCCGCTGGCAAGTGAAGAAGAGATCCAAGCTACACAGAGCC
TTGCCGCTCGTGGGCACTTCCAAATCCCTGAGGCAAATTTTGAGAACAACGATGACTTGTCTCTGCCAGAGAACCCAAAC
GGTCCATTGCTTTACGTTGCCGATGATGAACCGGTTAACTTACGCGTTCTTGAAAGCTTCCTAAGGCTTGAAGGCTACCG
CGTACGCACTATTTCTGATGGTCCAGAAACGCTGGCGTTAATTGAACAAGAAAAGCCAGAACTGCTTTTATTGGACATCA
TGATGCCGGGGATGAGTGGTTATCAAGTGTGTAGCGAGCTTCGTGAAACTTACGATCATGCAGAGCTGCCAATCATCATG
CTGACCGCATTAAGCCAAACAGAGGACCGAGTGAGAGGCTTTGAAGCGGGCGCGAATGATTACCTGACAAAACCATTCAA
CAAACAAGAGCTAGCGGCACGCATTCAGGCGCACCTAACGGCAAGTAAAGCGGAAATGCGACACATCGAAAACAAGTTAT
TGGAGTCGGAGCTGCGCCAACGTGCAGAAGTCGAAGCAAGCTTGTTGGAGACTCAAGGTCGATTGCTAGAGCAACTAGAG
TCTGCACCAGAAGCCATTATTTGTCTTCGTGAAGACCAACGCATTCGCTTTGCTAATGAAGCGGCCTGTAAGCTGTTTAA
ACGCAGCTTAGAACAGTTGAAGCGATCTTCAGCAGACGAATTGATCGCACCTAAGTTCTTGACGGTTAAGCAGCCTCACT
ACTGTGGCAAGATTGATATCTACATTGAAGATATTCGCCAAAACATCGAAGCCGACATTCTAAAACTGCCAGAAGGCTCT
GGTTTGGATGTGATGTACATCTTTAATGTCGGCGGCGGAGCTAACGCTGCTCGTATCCACAACCTAGAGACGGCAGTTGA
AGTGCTTTCATGCTACGCATTCGATGGCGACAAAGACCAACTTCAGAAGCTAAAAGAGCTTGGTGGAGAGTTTACACGCT
TAGCAGATAAAGCTTTGGGTAACAAGAAAGACAAACAAGAGCTGCTTCGTGAGGTTCTTGTCGATACCATGACCCATGCA
TTGGAATACTGGGAGTCTGTTACCGGAGAGACCAAGTTTGCGTTTGCTGAGCAAAGTGGCTTGTGGCGTGTTTACCTAGA
CCGCAGTACCTTGCAGACTCGTACCCTCGACAAATACATGCGTATCGAGACACTACCTAAAACACCACGTTGGAGAACGG
TATTAAGCTCGATTGAGTTTATCTTGGAGCACTGTAAAGAACAGAGCCCAGAACGCGCATACATTGAAGCTCAGCGCGAC
AAAATGCAGAGACTTTTAACAAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.528	100	0.766