Detailed information NTG0398727

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GII23_RS20955
• Genome accession: NZ_CP045858
• Coordinates: 4445340..4446677 (+)
• Length: 445 a.a.
• NCBI ID: WP_165564028.1
• Uniprot ID: -
• Organism: Stutzerimonas balearica strain EC28
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4440340..4451677

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII23_RS20930 (GII23_20865)	pgeF	4440494..4441225 (-)	732	WP_165564026.1	peptidoglycan editing factor PgeF	-
GII23_RS20935 (GII23_20870)	rluD	4441222..4442196 (-)	975	WP_043218532.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
GII23_RS20940 (GII23_20875)	-	4442344..4443336 (+)	993	WP_041107883.1	outer membrane protein assembly factor BamD	-
GII23_RS20945 (GII23_20880)	-	4443417..4443650 (+)	234	WP_061340058.1	PP0621 family protein	-
GII23_RS20950 (GII23_20885)	pilS	4443640..4445232 (+)	1593	WP_205884937.1	PAS domain-containing sensor histidine kinase	Regulator
GII23_RS20955 (GII23_20890)	pilR	4445340..4446677 (+)	1338	WP_165564028.1	sigma-54 dependent transcriptional regulator	Regulator
GII23_RS20960 (GII23_20895)	-	4446722..4447774 (-)	1053	WP_041107889.1	DUF2333 family protein	-
GII23_RS20965 (GII23_20900)	-	4447967..4449562 (+)	1596	WP_165564029.1	PleD family two-component system response regulator	-
GII23_RS20970 (GII23_20905)	-	4449684..4451648 (+)	1965	WP_165564030.1	methyl-accepting chemotaxis protein	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49611.03 Da
• Isoelectric Point: 5.9960

>NTDB_id=398727 GII23_RS20955 WP_165564028.1 4445340..4446677(+) (pilR) [Stutzerimonas balearica strain EC28]
MSARQKALIIDDEPDIRELLEITLGRMKLDTRSARSVKEARECLSREHYDLCLTDMRLPDGSGLELVQHIQQQYPHLPVA
MITAYGSLDTAISALKAGAFDFVTKPVDLNRLRELVSTALRLRPSTPEVPSDSRLLGNSPPMETLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGARAERPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRVVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LKRLAAECGEPPARLTADALAKLESYRFPGNVRELENMLERAYTLCEDDQIKAGDLRLAEAVPAADGQENNLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=398727 GII23_RS20955 WP_165564028.1 4445340..4446677(+) (pilR) [Stutzerimonas balearica strain EC28]
ATGAGCGCCCGCCAGAAAGCCCTGATCATCGATGACGAACCCGATATCCGCGAACTGCTGGAGATCACCCTAGGGCGCAT
GAAGCTCGACACGCGCAGCGCCCGCAGCGTCAAGGAGGCGCGCGAGTGCCTCAGCCGCGAGCATTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCTCCGGCCTGGAACTGGTACAGCACATACAGCAGCAGTACCCGCATCTGCCGGTCGCG
ATGATCACCGCGTACGGCAGCCTCGATACGGCAATCAGCGCACTGAAAGCGGGCGCTTTCGACTTCGTCACCAAACCGGT
GGATCTCAACCGTCTGCGCGAGCTCGTCAGCACGGCACTGCGCCTGCGCCCAAGCACCCCGGAAGTACCCAGCGACAGTC
GCCTGCTGGGCAACTCGCCGCCGATGGAGACGCTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGTCAGGCTCCGGTGTAT
ATCAGCGGCGAGTCCGGCAGCGGCAAGGAGCTGGTCGCGCGCCTGATCCACGAGCAGGGCGCACGCGCAGAGCGGCCTTT
CGTCCCGGTCAACTGCGGTGCGATCCCATCGGAGCTGATGGAGAGCGAGTTCTTCGGACACAAGAAAGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCGGGGCTGTTCCAGGCCGCCAATGGCGGCACGCTGTTCCTCGACGAGGTCGCCGACCTGCCT
TTACCCATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAAGCCGTGCGCGTGGTTGGCGGCGCTCAGGAGGTCATGGT
CGATGTGCGCATCCTCTGCGCCACGCACAAGGATCTCGCCAGCGAAGTGGCGGCCGGGCGTTTCCGCCAGGACCTCTATT
ACCGCCTGAACGTCATCGAACTGCGCGTGCCACCGCTGCGCGAGCGTCGCGAAGACATCGGTTTGCTGGCCGACGTGATG
CTCAAGCGCCTGGCGGCCGAGTGCGGCGAGCCGCCGGCACGGCTGACAGCCGATGCACTGGCCAAGCTGGAGAGTTATCG
CTTCCCCGGCAACGTCCGTGAACTGGAAAACATGCTCGAGCGCGCCTACACGCTTTGCGAAGACGACCAGATCAAGGCCG
GCGACCTGCGCCTGGCCGAGGCCGTGCCGGCAGCCGACGGCCAGGAGAACAATCTGGCGCAGATCGACAACCTGGAAGAC
CATCTGGAAGAGATCGAACGCAAGCTGATCATGCAGGCGCTGGAGGAGACGCGCTGGAACCGCACCGCCGCCGCACAGCG
CCTGGGGCTGACTTTCCGCTCGATGCGCTACCGGCTGAAAAAGCTCGGCCTAGATTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	83.784	99.775	0.836
pilR	Acinetobacter baumannii strain A118	50.98	100	0.526