Detailed information NTG0398706

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GII23_RS04430
• Genome accession: NZ_CP045858
• Coordinates: 968576..969838 (+)
• Length: 420 a.a.
• NCBI ID: WP_041108435.1
• Uniprot ID: -
• Organism: Stutzerimonas balearica strain EC28
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 963576..974838

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII23_RS04410 (GII23_04405)	-	964440..964841 (+)	402	WP_165562559.1	ribonucleotide reductase subunit alpha	-
GII23_RS04415 (GII23_04410)	rsmD	964838..965434 (-)	597	WP_041108441.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
GII23_RS04420 (GII23_04415)	-	965434..966984 (-)	1551	WP_165562560.1	pitrilysin family protein	-
GII23_RS04425 (GII23_04420)	-	966977..968347 (-)	1371	WP_165562561.1	pitrilysin family protein	-
GII23_RS04430 (GII23_04425)	pilA	968576..969838 (+)	1263	WP_041108435.1	signal recognition particle-docking protein FtsY	Machinery gene
GII23_RS04435 (GII23_04430)	ftsE	969835..970506 (+)	672	WP_041108434.1	cell division ATP-binding protein FtsE	-
GII23_RS04440 (GII23_04435)	ftsX	970503..971525 (+)	1023	WP_165562562.1	permease-like cell division protein FtsX	-
GII23_RS04445 (GII23_04440)	-	971631..972836 (+)	1206	WP_125872176.1	ISL3 family transposase	-
GII23_RS04450 (GII23_04445)	rpoH	972956..973810 (+)	855	WP_041108430.1	RNA polymerase sigma factor RpoH	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 45005.08 Da
• Isoelectric Point: 4.8101

>NTDB_id=398706 GII23_RS04430 WP_041108435.1 968576..969838(+) (pilA) [Stutzerimonas balearica strain EC28]
MFGSNDDKKTPAEAGEKKGLFGWLRKKPQTPAAEPPATEPPEESQPLADEPDREAEQTEREQLAEAHEAPVHEPAPEPVE
PPSVQLPEPEPVPSAEPTQPTAAAPEPAAPTRLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLEELETRLLTAD
VGVEATGAIMQNLTRRVSRKELADSGALYRALQEELAGLLRPVEQPLVVDGAKQPYVILVVGVNGVGKTTTIGKLAKKLQ
NEGKKVMLAAGDTFRAAAVEQLQVWGERNRIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELK
KVRRVIGKLDETAPHEVLLVLDAGTGQNAINQTRQFNQAVELSGIALTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGID
DLRTFEADAFVKALFGQDER

Nucleotide

• Length: 1263 bp

>NTDB_id=398706 GII23_RS04430 WP_041108435.1 968576..969838(+) (pilA) [Stutzerimonas balearica strain EC28]
ATGTTTGGTTCAAACGACGACAAGAAGACGCCGGCCGAGGCCGGCGAAAAGAAAGGGCTGTTCGGCTGGTTGCGCAAGAA
GCCGCAGACGCCTGCCGCCGAGCCGCCGGCGACCGAACCGCCGGAAGAGAGCCAGCCACTGGCCGATGAGCCCGACCGCG
AAGCCGAGCAAACGGAGCGCGAGCAACTGGCCGAGGCGCACGAAGCGCCGGTGCATGAGCCCGCCCCTGAGCCGGTCGAG
CCGCCCTCGGTACAGCTCCCCGAGCCCGAGCCTGTACCGAGTGCCGAGCCCACGCAGCCGACCGCTGCTGCGCCGGAGCC
CGCTGCGCCGACCCGGCTGGGCTTCTTCGCCCGTTTGCGCCAGGGCCTGTCCAAGACCAGCGCCAGCATCGGCGAGGGCA
TGGCCAGTCTGTTCCTTGGCAAGAAGGCGATCGATGACGACCTGCTCGAAGAGCTGGAAACACGCCTGCTGACCGCCGAC
GTCGGCGTCGAGGCGACTGGCGCGATCATGCAGAACCTGACCCGCCGGGTCTCGCGCAAGGAGCTGGCCGACAGCGGCGC
GCTGTATCGCGCGCTGCAGGAAGAGCTGGCCGGGCTGCTGCGCCCGGTCGAGCAGCCGCTGGTCGTCGATGGCGCCAAGC
AGCCCTACGTGATCCTCGTGGTCGGGGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTTGCCAAGAAGCTGCAG
AACGAAGGCAAGAAGGTCATGCTCGCCGCCGGCGATACCTTCCGCGCCGCGGCAGTCGAGCAGCTGCAGGTCTGGGGCGA
GCGCAACCGTATTCCGGTGATTGCCCAGCATACCGGCGCCGATTCCGCCTCGGTCATCTTCGATGCGGTGCAGGCGGCCA
AGGCGCGCGGCATCGACGTGCTGATCGCCGATACCGCCGGTCGTCTGCATACCAAGGACAACCTCATGGAGGAGCTGAAG
AAGGTGCGCCGGGTGATCGGCAAGCTGGACGAGACCGCGCCCCATGAAGTGCTGCTGGTGCTCGATGCCGGCACCGGGCA
AAACGCGATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTCAGTGGCATCGCCCTGACCAAGCTCGACGGCACGG
CCAAGGGCGGCGTGATCTTCGCGCTGGCCAAACAGTTCGGCACGCCCATCCGCTACATCGGCGTCGGTGAAGGGATCGAC
GACCTGCGCACTTTCGAGGCCGATGCCTTCGTCAAGGCTCTGTTCGGTCAGGACGAGCGATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (131-196)

• SRP54-type protein, GTPase domain (SRP54) (216-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.227	100	0.486