Detailed information
Bioinformatically predicted
Overview
| Name | comGH | Type | Machinery gene |
| Locus tag | INV104_RS10265 | Genome accession | NC_017591 |
| Coordinates | 1931170..1932123 (-) | Length | 317 a.a. |
| NCBI ID | WP_000345118.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae INV104 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1926170..1937123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INV104_RS10240 (INV104_17570) | - | 1926931..1927554 (-) | 624 | WP_000932638.1 | hypothetical protein | - |
| INV104_RS10245 (INV104_17580) | jag | 1927605..1928591 (-) | 987 | WP_000260014.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| INV104_RS10250 (INV104_17590) | - | 1928610..1929434 (-) | 825 | WP_000727909.1 | membrane protein insertase YidC | - |
| INV104_RS10255 (INV104_17600) | rnpA | 1929409..1929780 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| INV104_RS14020 | - | 1929797..1929928 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| INV104_RS10260 (INV104_17610) | - | 1929929..1931119 (-) | 1191 | WP_000167769.1 | acetate kinase | - |
| INV104_RS10265 (INV104_17620) | comGH | 1931170..1932123 (-) | 954 | WP_000345118.1 | class I SAM-dependent methyltransferase | Machinery gene |
| INV104_RS12495 | - | 1932469..1933270 (+) | 802 | WP_128887635.1 | IS5 family transposase | - |
| INV104_RS10280 | - | 1933421..1933897 (+) | 477 | WP_000777686.1 | GNAT family N-acetyltransferase | - |
| INV104_RS10285 (INV104_17630) | comGG/cglG | 1934571..1934963 (-) | 393 | WP_001818966.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| INV104_RS10290 (INV104_17640) | comGF/cglF | 1934941..1935402 (-) | 462 | WP_000250537.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| INV104_RS10295 (INV104_17650) | comGE/cglE | 1935365..1935667 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| INV104_RS10300 (INV104_17660) | comGD/cglD | 1935630..1936034 (-) | 405 | WP_000588017.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| INV104_RS10305 (INV104_17670) | comGC/cglC | 1936027..1936353 (-) | 327 | WP_000738625.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35699.89 Da Isoelectric Point: 4.2434
>NTDB_id=39855 INV104_RS10265 WP_000345118.1 1931170..1932123(-) (comGH) [Streptococcus pneumoniae INV104]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLISLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLISLDKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANAKQSKTIFILQKKSEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=39855 INV104_RS10265 WP_000345118.1 1931170..1932123(-) (comGH) [Streptococcus pneumoniae INV104]
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTGATCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTGGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACACCGGATGCTATTGCTTTGCTTTTGGTGTTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATTACTATCCTCGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTGATCTCGCTTGATAAAA
AGGTGGATTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATCTGGCAGCTAGCATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCTAAGACTATTTTTATCCTACAGAAGAAAAGTGAAATAGCAGTGGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGH | Streptococcus mutans UA140 |
54.952 |
98.738 |
0.543 |
| comGH | Streptococcus mutans UA159 |
54.633 |
98.738 |
0.539 |