Detailed information NTG0398549

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HR070_RS00915
• Genome accession: NZ_CP054236
• Coordinates: 194740..195723 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain EcPF5
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 189740..200723

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HR070_RS00895 (HR070_00895)	dppA	190884..192491 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
HR070_RS00900 (HR070_00900)	-	192553..192780 (-)	228	WP_000198577.1	hypothetical protein	-
HR070_RS00905 (HR070_00905)	dppB	192798..193817 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HR070_RS00910 (HR070_00910)	dppC	193827..194729 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HR070_RS00915 (HR070_00915)	amiE	194740..195723 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
HR070_RS00920 (HR070_00920)	dppF	195720..196724 (+)	1005	WP_000103580.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HR070_RS00925 (HR070_00925)	yhjV	196754..198025 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
HR070_RS00930 (HR070_00930)	-	198501..198608 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
HR070_RS00935 (HR070_00935)	-	198984..199091 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=398549 HR070_RS00915 WP_001196477.1 194740..195723(+) (amiE) [Escherichia coli strain EcPF5]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=398549 HR070_RS00915 WP_001196477.1 194740..195723(+) (amiE) [Escherichia coli strain EcPF5]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404