Detailed information NTG0398470

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: GIJ09_RS00295
• Genome accession: NZ_CP045832
• Coordinates: 53523..56648 (-)
• Length: 1041 a.a.
• NCBI ID: WP_153707846.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain AUSMDU00010541
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 48523..61648

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GIJ09_RS00275 (GIJ09_00275)	-	49555..49944 (-)	390	WP_003687278.1	DUF559 domain-containing protein	-
GIJ09_RS00280 (GIJ09_00280)	-	50107..50486 (-)	380	Protein_49	VOC family protein	-
GIJ09_RS00285 (GIJ09_00285)	carA	50540..51673 (-)	1134	WP_003687283.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
GIJ09_RS00290 (GIJ09_00290)	-	52388..52672 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
GIJ09_RS00295 (GIJ09_00295)	pilC	53523..56648 (-)	3126	WP_153707846.1	PilC family type IV pilus tip adhesin	Machinery gene
GIJ09_RS00300 (GIJ09_00300)	apbC	58951..60030 (-)	1080	WP_003696650.1	iron-sulfur cluster carrier protein ApbC	-
GIJ09_RS00310 (GIJ09_00310)	-	60397..60906 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-

Sequence

Protein

• Length: 1041 a.a.
• Molecular weight: 114630.45 Da
• Isoelectric Point: 9.9789

>NTDB_id=398470 GIJ09_RS00295 WP_153707846.1 53523..56648(-) (pilC) [Neisseria gonorrhoeae strain AUSMDU00010541]
MNKTLKRQVFRHTALYAAILMFSHTGGGGGGQAQARDYAIIMNERNQPDVRWDGQYQKSQLREKDRERKFIYNKGRQGGG
SVFFDNTDELVSQQSGTAVFGTATYLPPYGKVSGFDADGLKKRGNAVNWIRTTRPGLAGYVYTGVICRNAKQCPELIYET
KFSFDGIGLAKGGNRKLDRHPDPSRDNSPIYKLKDYPWLGVSFNLGGENTAKDGRSSSRWISSFSEDNNNQTIVFTTRGH
PISLGDWQRESTAMAYYLNAKLHLLDKKKIENIAPGKTVDLGTLRPRVEAKVRRGWSLLNFWATWDIKDTGQIPVKLGLP
EVKAGRCINKPNPNPKSALSPALTAPALWFGPVQNGKVQMYSASVSTYPGSSSSRIFLQELKTKTDPGRPGRHSLAALNT
QDIKSREPNFNSRQTVIRLPSGVYRIAPTRDRIVGLNGNDGKNDTFGIYKDRLVTPEADEWAKVLLPWTVRYYGNDDIFK
TFNQPNSKTQNGKKQYSQKYRIRTKEDDNDKPRDLGDIVNSPITAVGGYLATSANDGMVHIFKKTGTDQRGYELKLSYIP
GTMGRKDIENQDSTLAKELRTFAEKGYVGDRYGVDGGFVLRRITDDQDRQKHFFMFGAMGLGGRGAYALDLTKIDSNNLT
GVSMFDVKDGDNNGKNRVEVKLGYTVGTPQIGKTQNGKYAAFLASGYAAKDIVSSDNTTALYVYDLGNGSGSLIKKIEAP
GGKGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSNSDPNKWSAKAIFEGTKPITSAPAVSRLKDKRVVIFGTGSDL
TEDDVLNTKEQYIYGIFDDDKPTVNVKVTNGTGGGLLEQVLSEENKILFLINNKASGGSADKGWVVKLREGERVTVKPTV
VLRTAFVTIRKYTGNDKCDAQTAILGINTADGGALTPRSARPIVPGDQVAQYSGHKKMNGKSIPIGCMWKNSKTVCPNGY
VYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREVF
F

Nucleotide

• Length: 3126 bp

>NTDB_id=398470 GIJ09_RS00295 WP_153707846.1 53523..56648(-) (pilC) [Neisseria gonorrhoeae strain AUSMDU00010541]
ATGAATAAAACTTTGAAAAGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGGGCAGGCGCAAGCCCGTGACTACGCTATTATCATGAACGAACGAAATCAGCCGGATGTAAGGTGGGATG
GGCAATATCAAAAATCACAATTAAGGGAAAAAGACAGGGAACGCAAATTTATCTATAATAAAGGCAGACAGGGTGGAGGC
TCTGTCTTTTTCGACAATACCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCC
GCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGGGCTGAAAAAGCGCGGCAATGCCGTCAATTGGATTCGTACCACCC
GGCCCGGGCTGGCAGGCTACGTCTACACCGGCGTCATATGCAGAAACGCAAAGCAATGCCCCGAACTTATCTATGAGACC
AAATTTTCCTTCGACGGCATCGGTTTGGCAAAAGGGGGAAACCGAAAGCTGGATAGGCACCCGGACCCAAGCCGCGACAA
TTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGGGCGGCGAGAATACCGCCAAAGATG
GCAGATCATCCAGCAGATGGATATCTTCTTTTAGTGAAGACAATAATAATCAAACCATCGTCTTTACGACACGAGGCCAC
CCTATTTCCCTTGGCGACTGGCAGCGCGAAAGTACCGCCATGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGATAA
AAAAAAGATTGAAAATATCGCGCCAGGCAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGGCAAAGGTAAGGC
GGGGGTGGAGTCTGCTAAATTTTTGGGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGTCTGCCG
GAAGTCAAGGCCGGGCGCTGCATCAACAAACCGAACCCCAATCCCAAATCAGCCCTTTCGCCGGCACTGACCGCCCCCGC
GCTGTGGTTCGGTCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCTACCCCGGCAGCTCGAGCA
GCCGCATCTTCCTCCAAGAGCTGAAAACTAAAACCGACCCCGGCAGGCCCGGCCGGCATTCCCTCGCCGCTTTGAATACG
CAGGATATCAAATCCCGCGAGCCGAATTTCAACTCAAGGCAGACCGTGATCCGATTGCCGAGCGGCGTGTACCGGATCGC
CCCGACTCGCGACAGGATCGTGGGTTTGAATGGCAATGACGGCAAAAACGACACTTTCGGCATCTACAAGGACAGGCTCG
TCACACCTGAGGCCGACGAGTGGGCAAAAGTGCTGCTGCCTTGGACGGTCCGGTATTACGGTAATGACGATATATTTAAA
ACATTCAACCAACCAAACAGCAAAACACAAAACGGCAAAAAACAATACAGCCAAAAATACCGCATCCGCACAAAAGAAGA
TGACAATGACAAACCCCGCGATTTGGGCGACATCGTCAACAGCCCGATAACGGCGGTCGGCGGGTATCTGGCAACTTCTG
CCAACGACGGGATGGTGCATATCTTCAAAAAAACCGGCACAGACCAACGAGGCTACGAACTGAAGCTCAGCTACATCCCC
GGCACGATGGGGCGTAAGGATATTGAAAACCAAGACTCCACCCTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTA
TGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAGGACAGGCAAAAACATTTCT
TTATGTTTGGTGCGATGGGCCTGGGCGGCAGAGGCGCATACGCCTTGGATTTGACCAAAATCGACAGCAACAACCTGACC
GGCGTTTCCATGTTTGATGTCAAAGATGGCGATAATAACGGCAAAAATCGCGTGGAAGTGAAATTAGGCTACACCGTCGG
CACGCCGCAAATCGGCAAAACCCAAAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAGATATTGTCA
GCAGCGATAATACAACCGCGCTGTATGTGTATGATTTGGGAAACGGCAGTGGTAGTCTGATTAAAAAAATCGAAGCACCC
GGCGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGA
CCGGGGCGGCAATATGTACCGCTTTGATTTGAGCAATTCCGATCCTAATAAATGGTCTGCAAAGGCTATTTTCGAAGGCA
CAAAACCGATTACTTCCGCGCCCGCCGTTTCCCGACTGAAAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTG
ACCGAAGATGATGTACTGAATACGAAAGAACAATATATTTACGGTATCTTTGACGACGATAAGCCGACGGTTAATGTAAA
GGTAACAAACGGCACGGGAGGCGGGCTGCTCGAGCAAGTGCTTAGCGAGGAAAATAAAATCTTGTTCCTGATAAATAATA
AGGCATCCGGCGGATCGGCCGATAAAGGCTGGGTAGTGAAATTGAGGGAAGGAGAACGCGTTACCGTCAAACCGACCGTG
GTATTGCGTACCGCCTTCGTGACCATCCGGAAATATACGGGTAATGACAAATGCGACGCGCAAACCGCCATTTTGGGCAT
CAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGGTGACCAGGTTGCGCAATATTCCG
GCCATAAGAAAATGAACGGCAAGTCCATCCCCATAGGCTGCATGTGGAAAAACAGCAAAACCGTCTGCCCGAACGGATAT
GTTTACGACAAACCGGTTAATGTGCGTTACCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGATGC
AGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCC
TGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTC
TTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (515-853)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	74.691	100	0.754