Detailed information NTG0398420

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GII76_RS19775
• Genome accession: NZ_CP045826
• Coordinates: 3801116..3802261 (+)
• Length: 381 a.a.
• NCBI ID: WP_015714890.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 73
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3796116..3807261

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII76_RS19750 (GII76_19750)	albF	3796132..3797412 (+)	1281	WP_029726079.1	pitrilysin family protein	-
GII76_RS19755 (GII76_19755)	albG	3797409..3798110 (+)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
GII76_RS19760 (GII76_19760)	ywhL	3798116..3799492 (-)	1377	WP_015250987.1	YncE family protein	-
GII76_RS19765 (GII76_19765)	ywhK	3799531..3800886 (-)	1356	WP_003227552.1	YncE family protein	-
GII76_RS19775 (GII76_19775)	rapF	3801116..3802261 (+)	1146	WP_015714890.1	response regulator aspartate phosphatase RapF	Regulator
GII76_RS19780 (GII76_19780)	phrF	3802245..3802364 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
GII76_RS19785 (GII76_19785)	-	3802621..3803100 (+)	480	WP_015714892.1	hypothetical protein	-
GII76_RS19790 (GII76_19790)	-	3803249..3804037 (+)	789	WP_015714893.1	membrane protein	-
GII76_RS19795 (GII76_19795)	-	3804024..3804698 (+)	675	WP_015714894.1	hypothetical protein	-
GII76_RS19800 (GII76_19800)	-	3804708..3805505 (+)	798	WP_231573542.1	hypothetical protein	-
GII76_RS19805 (GII76_19805)	-	3805508..3806155 (+)	648	WP_015714896.1	ABC transporter ATP-binding protein	-
GII76_RS19810 (GII76_19810)	-	3806148..3806708 (+)	561	WP_029726083.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45571.01 Da
• Isoelectric Point: 4.9848

>NTDB_id=398420 GII76_RS19775 WP_015714890.1 3801116..3802261(+) (rapF) [Bacillus subtilis strain 73]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLNLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=398420 GII76_RS19775 WP_015714890.1 3801116..3802261(+) (rapF) [Bacillus subtilis strain 73]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTAATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTAAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572