Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   GII76_RS08225 Genome accession   NZ_CP045826
Coordinates   1570274..1570849 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain 73     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1565274..1575849
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII76_RS08195 (GII76_08195) dapD 1565460..1566170 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  GII76_RS08200 (GII76_08200) dapI 1566240..1567364 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  GII76_RS08205 (GII76_08205) ykuS 1567426..1567671 (+) 246 WP_003232382.1 YkuS family protein -
  GII76_RS08210 (GII76_08210) mscT 1567708..1568511 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  GII76_RS08215 (GII76_08215) ahpA 1568748..1569290 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  GII76_RS08220 (GII76_08220) ykuV 1569362..1569808 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  GII76_RS08225 (GII76_08225) rok 1570274..1570849 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  GII76_RS08230 (GII76_08230) cse15 1570890..1571855 (-) 966 WP_029727015.1 spore protein Cse15 -
  GII76_RS08235 (GII76_08235) mobA 1571992..1572591 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  GII76_RS08240 (GII76_08240) moeB 1572642..1573661 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  GII76_RS08245 (GII76_08245) glp 1573679..1574971 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  GII76_RS08250 (GII76_08250) mobB 1574932..1575453 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=398375 GII76_RS08225 WP_003232378.1 1570274..1570849(+) (rok) [Bacillus subtilis strain 73]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=398375 GII76_RS08225 WP_003232378.1 1570274..1570849(+) (rok) [Bacillus subtilis strain 73]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment