Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   GII76_RS04975 Genome accession   NZ_CP045826
Coordinates   969406..970200 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain 73     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 964406..975200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII76_RS04945 (GII76_04945) sxzA 965245..966276 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  GII76_RS04950 (GII76_04950) yfhB 966391..967272 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  GII76_RS04955 (GII76_04955) yfhC 967360..967944 (+) 585 WP_003243940.1 nitroreductase -
  GII76_RS04960 (GII76_04960) yfhD 967983..968174 (-) 192 WP_003233561.1 YfhD family protein -
  GII76_RS04965 (GII76_04965) yfhE 968241..968351 (-) 111 WP_003223230.1 YfhE family protein -
  GII76_RS04970 (GII76_04970) yfhF 968406..969317 (-) 912 WP_029726845.1 TIGR01777 family oxidoreductase -
  GII76_RS04975 (GII76_04975) recX 969406..970200 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  GII76_RS04980 (GII76_04980) yfhH 970202..970522 (+) 321 WP_029726843.1 YfhH family protein -
  GII76_RS04985 (GII76_04985) yfhI 970659..971852 (+) 1194 WP_072692836.1 MFS transporter -
  GII76_RS04990 (GII76_04990) sspK 971884..972036 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  GII76_RS04995 (GII76_04995) yfhJ 972161..972430 (+) 270 WP_003243789.1 YfhJ family protein -
  GII76_RS05000 (GII76_05000) yfhK 972575..973093 (+) 519 WP_029726841.1 SH3 domain-containing protein -
  GII76_RS05005 (GII76_05005) spdL 973178..973495 (+) 318 WP_032679045.1 SdpC immunity protein SpdL -
  GII76_RS05010 (GII76_05010) ephM 973497..974357 (+) 861 WP_029726839.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=398357 GII76_RS04975 WP_029726844.1 969406..970200(+) (recX) [Bacillus subtilis strain 73]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=398357 GII76_RS04975 WP_029726844.1 969406..970200(+) (recX) [Bacillus subtilis strain 73]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment