Detailed information NTG0398339

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GII77_RS19590
• Genome accession: NZ_CP045825
• Coordinates: 3794998..3796143 (+)
• Length: 381 a.a.
• NCBI ID: WP_015250985.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 75
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3789998..3801143

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII77_RS19570 (GII77_19570)	albF	3790014..3791294 (+)	1281	WP_015250989.1	pitrilysin family protein	-
GII77_RS19575 (GII77_19575)	albG	3791291..3791992 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
GII77_RS19580 (GII77_19580)	ywhL	3791998..3793374 (-)	1377	WP_015250987.1	YncE family protein	-
GII77_RS19585 (GII77_19585)	ywhK	3793413..3794768 (-)	1356	WP_015250986.1	YncE family protein	-
GII77_RS19590 (GII77_19590)	rapF	3794998..3796143 (+)	1146	WP_015250985.1	response regulator aspartate phosphatase RapF	Regulator
GII77_RS19595 (GII77_19595)	phrF	3796127..3796246 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
GII77_RS19600 (GII77_19600)	ywhH	3796344..3796806 (+)	463	Protein_3835	YbaK/EbsC family protein	-
GII77_RS19605 (GII77_19605)	speB	3796838..3797710 (-)	873	WP_015250983.1	agmatinase	-
GII77_RS19610 (GII77_19610)	speE	3797771..3798601 (-)	831	WP_003227543.1	spermidine synthase	-
GII77_RS19615 (GII77_19615)	pbpG	3798803..3800878 (+)	2076	WP_048654792.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45590.06 Da
• Isoelectric Point: 5.0624

>NTDB_id=398339 GII77_RS19590 WP_015250985.1 3794998..3796143(+) (rapF) [Bacillus subtilis strain 75]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=398339 GII77_RS19590 WP_015250985.1 3794998..3796143(+) (rapF) [Bacillus subtilis strain 75]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGGCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572