Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   GII77_RS08310 Genome accession   NZ_CP045825
Coordinates   1560515..1560979 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain 75     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1555515..1565979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII77_RS08290 (GII77_08290) kinA 1555982..1557802 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  GII77_RS08295 (GII77_08295) dapX 1557812..1558993 (-) 1182 WP_015252196.1 aminotransferase A -
  GII77_RS08300 (GII77_08300) - 1559195..1559356 (-) 162 WP_003245246.1 hypothetical protein -
  GII77_RS08305 (GII77_08305) cheV 1559560..1560471 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  GII77_RS08310 (GII77_08310) kre 1560515..1560979 (-) 465 WP_003232406.1 YkyB family protein Regulator
  GII77_RS08315 (GII77_08315) ykuC 1561105..1562397 (-) 1293 WP_015252195.1 MFS transporter -
  GII77_RS08320 (GII77_08320) ltdD 1562473..1562967 (-) 495 WP_080019551.1 L,D-transpeptidase family protein -
  GII77_RS08325 (GII77_08325) ppeE 1563024..1563884 (-) 861 WP_003232400.1 metallophosphoesterase -
  GII77_RS08330 (GII77_08330) fadH 1564027..1564791 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=398293 GII77_RS08310 WP_003232406.1 1560515..1560979(-) (kre) [Bacillus subtilis strain 75]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=398293 GII77_RS08310 WP_003232406.1 1560515..1560979(-) (kre) [Bacillus subtilis strain 75]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment