Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   GII77_RS04855 Genome accession   NZ_CP045825
Coordinates   938329..939123 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain 75     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 933329..944123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII77_RS04825 (GII77_04825) sxzA 934168..935199 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  GII77_RS04830 (GII77_04830) yfhB 935314..936195 (+) 882 WP_015252519.1 PhzF family phenazine biosynthesis isomerase -
  GII77_RS04835 (GII77_04835) yfhC 936283..936867 (+) 585 WP_015252518.1 NAD(P)H nitroreductase -
  GII77_RS04840 (GII77_04840) yfhD 936906..937097 (-) 192 WP_003233561.1 YfhD family protein -
  GII77_RS04845 (GII77_04845) yfhE 937164..937274 (-) 111 WP_003223230.1 YfhE family protein -
  GII77_RS04850 (GII77_04850) yfhF 937329..938240 (-) 912 WP_044052591.1 TIGR01777 family oxidoreductase -
  GII77_RS04855 (GII77_04855) recX 938329..939123 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  GII77_RS04860 (GII77_04860) yfhH 939125..939439 (+) 315 WP_003244592.1 YfhH family protein -
  GII77_RS04865 (GII77_04865) yfhI 939582..940775 (+) 1194 WP_003243500.1 MFS transporter -
  GII77_RS04870 (GII77_04870) sspK 940807..940959 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  GII77_RS04875 (GII77_04875) yfhJ 941084..941353 (+) 270 WP_015252516.1 YfhJ family protein -
  GII77_RS04880 (GII77_04880) yfhK 941498..942016 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  GII77_RS04885 (GII77_04885) spdL 942101..942433 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  GII77_RS04890 (GII77_04890) ephM 942420..943280 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=398276 GII77_RS04855 WP_003243354.1 938329..939123(+) (recX) [Bacillus subtilis strain 75]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=398276 GII77_RS04855 WP_003243354.1 938329..939123(+) (recX) [Bacillus subtilis strain 75]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment