Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   GII78_RS07680 Genome accession   NZ_CP045824
Coordinates   1471901..1472476 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain MB8_B10     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1466901..1477476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII78_RS07650 (GII78_07650) dapD 1467087..1467797 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  GII78_RS07655 (GII78_07655) dapI 1467867..1468991 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  GII78_RS07660 (GII78_07660) ykuS 1469053..1469298 (+) 246 WP_003232382.1 YkuS family protein -
  GII78_RS07665 (GII78_07665) mscT 1469335..1470138 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  GII78_RS07670 (GII78_07670) ahpA 1470375..1470917 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  GII78_RS07675 (GII78_07675) ykuV 1470989..1471435 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  GII78_RS07680 (GII78_07680) rok 1471901..1472476 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  GII78_RS07685 (GII78_07685) cse15 1472517..1473482 (-) 966 WP_029727015.1 spore protein Cse15 -
  GII78_RS07690 (GII78_07690) mobA 1473619..1474218 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  GII78_RS07695 (GII78_07695) moeB 1474269..1475288 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  GII78_RS07700 (GII78_07700) glp 1475306..1476598 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  GII78_RS07705 (GII78_07705) mobB 1476559..1477080 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=398215 GII78_RS07680 WP_003232378.1 1471901..1472476(+) (rok) [Bacillus subtilis strain MB8_B10]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=398215 GII78_RS07680 WP_003232378.1 1471901..1472476(+) (rok) [Bacillus subtilis strain MB8_B10]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment