Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   GII78_RS07580 Genome accession   NZ_CP045824
Coordinates   1456023..1456487 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain MB8_B10     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1451023..1461487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII78_RS07560 (GII78_07560) kinA 1451490..1453310 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  GII78_RS07565 (GII78_07565) dapX 1453320..1454501 (-) 1182 WP_014476653.1 aminotransferase A -
  GII78_RS07570 (GII78_07570) - 1454703..1454864 (-) 162 WP_003245246.1 hypothetical protein -
  GII78_RS07575 (GII78_07575) cheV 1455068..1455979 (+) 912 WP_029727006.1 chemotaxis protein CheV -
  GII78_RS07580 (GII78_07580) kre 1456023..1456487 (-) 465 WP_003232406.1 YkyB family protein Regulator
  GII78_RS07585 (GII78_07585) ykuC 1456613..1457905 (-) 1293 WP_017697269.1 MFS transporter -
  GII78_RS07590 (GII78_07590) ltdD 1457981..1458475 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  GII78_RS07595 (GII78_07595) ppeE 1458532..1459392 (-) 861 WP_017697271.1 metallophosphoesterase -
  GII78_RS07600 (GII78_07600) fadH 1459535..1460299 (+) 765 WP_113712983.1 2,4-dienoyl-CoA reductase -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=398214 GII78_RS07580 WP_003232406.1 1456023..1456487(-) (kre) [Bacillus subtilis strain MB8_B10]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=398214 GII78_RS07580 WP_003232406.1 1456023..1456487(-) (kre) [Bacillus subtilis strain MB8_B10]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment