Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   GII79_RS04525 Genome accession   NZ_CP045823
Coordinates   893760..894554 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain MB8_B1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 888760..899554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII79_RS04495 (GII79_04495) sxzA 889601..890632 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  GII79_RS04500 (GII79_04500) yfhB 890747..891628 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  GII79_RS04505 (GII79_04505) yfhC 891716..892298 (+) 583 Protein_841 nitroreductase -
  GII79_RS04510 (GII79_04510) yfhD 892337..892528 (-) 192 WP_003233561.1 YfhD family protein -
  GII79_RS04515 (GII79_04515) yfhE 892595..892705 (-) 111 WP_003223230.1 YfhE family protein -
  GII79_RS04520 (GII79_04520) yfhF 892760..893671 (-) 912 WP_029726845.1 TIGR01777 family oxidoreductase -
  GII79_RS04525 (GII79_04525) recX 893760..894554 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  GII79_RS04530 (GII79_04530) yfhH 894556..894876 (+) 321 WP_029726843.1 YfhH family protein -
  GII79_RS04535 (GII79_04535) yfhI 895013..896206 (+) 1194 WP_153912168.1 MFS transporter -
  GII79_RS04540 (GII79_04540) sspK 896238..896390 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  GII79_RS04545 (GII79_04545) yfhJ 896515..896784 (+) 270 WP_003243789.1 YfhJ family protein -
  GII79_RS04550 (GII79_04550) yfhK 896929..897447 (+) 519 WP_029726841.1 SH3 domain-containing protein -
  GII79_RS04555 (GII79_04555) spdL 897532..897849 (+) 318 WP_032679045.1 SdpC immunity protein SpdL -
  GII79_RS04560 (GII79_04560) ephM 897851..898711 (+) 861 WP_029726839.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=398118 GII79_RS04525 WP_029726844.1 893760..894554(+) (recX) [Bacillus subtilis strain MB8_B1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=398118 GII79_RS04525 WP_029726844.1 893760..894554(+) (recX) [Bacillus subtilis strain MB8_B1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment