Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   INV104_RS05835 Genome accession   NC_017591
Coordinates   1110206..1110670 (-) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus pneumoniae INV104     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1105206..1115670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INV104_RS05815 (INV104_10050) - 1106157..1107125 (-) 969 WP_000105360.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  INV104_RS05820 (INV104_10060) pdrM 1107279..1108640 (-) 1362 WP_000278533.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  INV104_RS05825 - 1108651..1108911 (-) 261 WP_001105925.1 hypothetical protein -
  INV104_RS05830 (INV104_10070) - 1108925..1110193 (-) 1269 WP_000924490.1 dihydroorotase -
  INV104_RS05835 (INV104_10080) mutX 1110206..1110670 (-) 465 WP_001135768.1 NUDIX hydrolase Machinery gene
  INV104_RS05840 (INV104_10090) - 1110680..1111333 (-) 654 WP_000401326.1 uracil-DNA glycosylase -
  INV104_RS05845 (INV104_10100) - 1111469..1112071 (-) 603 WP_001812270.1 hypothetical protein -
  INV104_RS05850 (INV104_10110) - 1112129..1112842 (-) 714 WP_000499429.1 YjjG family noncanonical pyrimidine nucleotidase -
  INV104_RS05855 (INV104_10120) - 1113258..1113476 (-) 219 Protein_1141 PTS mannose family transporter subunit IIA -
  INV104_RS14095 - 1113476..1113550 (-) 75 Protein_1142 dihydroxyacetone kinase subunit L -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=39811 INV104_RS05835 WP_001135768.1 1110206..1110670(-) (mutX) [Streptococcus pneumoniae INV104]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=39811 INV104_RS05835 WP_001135768.1 1110206..1110670(-) (mutX) [Streptococcus pneumoniae INV104]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGACGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987

Multiple sequence alignment