Detailed information NTG0398096

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: HR076_RS19215
• Genome accession: NZ_CP054214
• Coordinates: 3957798..3959003 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain EcPF40
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3952798..3964003

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HR076_RS19200 (HR076_19205)	-	3953313..3954989 (+)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-
HR076_RS19205 (HR076_19210)	kdsB	3954999..3955739 (+)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
HR076_RS19210 (HR076_19215)	-	3955736..3957763 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
HR076_RS19215 (HR076_19220)	kpsS	3957798..3959003 (+)	1206	WP_001161835.1	capsular biosynthesis protein	Regulator
HR076_RS19220 (HR076_19225)	-	3959153..3960382 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
HR076_RS19225 (HR076_19230)	-	3960372..3961520 (-)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
HR076_RS19230 (HR076_19235)	neuC	3961513..3962688 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
HR076_RS19235 (HR076_19240)	-	3962685..3963941 (-)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=398096 HR076_RS19215 WP_001161835.1 3957798..3959003(+) (kpsS) [Escherichia coli strain EcPF40]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=398096 HR076_RS19215 WP_001161835.1 3957798..3959003(+) (kpsS) [Escherichia coli strain EcPF40]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387