Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | HR076_RS17510 | Genome accession | NZ_CP054214 |
| Coordinates | 3586690..3587205 (-) | Length | 171 a.a. |
| NCBI ID | WP_001130208.1 | Uniprot ID | Q8FEP8 |
| Organism | Escherichia coli strain EcPF40 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3581690..3592205
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR076_RS17485 (HR076_17490) | ygaH | 3582105..3582440 (+) | 336 | WP_000119749.1 | L-valine transporter subunit YgaH | - |
| HR076_RS17490 (HR076_17495) | emrR | 3582531..3583061 (+) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| HR076_RS17495 (HR076_17500) | emrA | 3583188..3584360 (+) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| HR076_RS17500 (HR076_17505) | emrB | 3584377..3585915 (+) | 1539 | WP_001539415.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| HR076_RS17505 (HR076_17510) | tnpA | 3586095..3586553 (+) | 459 | WP_000526113.1 | IS200/IS605-like element IS200C family transposase | - |
| HR076_RS17510 (HR076_17515) | luxS | 3586690..3587205 (-) | 516 | WP_001130208.1 | S-ribosylhomocysteine lyase | Regulator |
| HR076_RS17515 (HR076_17520) | gshA | 3587355..3588911 (-) | 1557 | WP_001539417.1 | glutamate--cysteine ligase | - |
| HR076_RS17520 (HR076_17525) | yqaA | 3588984..3589412 (-) | 429 | WP_001287462.1 | YqaA family protein | - |
| HR076_RS17525 (HR076_17530) | yqaB | 3589409..3589975 (-) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| HR076_RS17550 (HR076_17555) | csrA | 3591025..3591210 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19443.21 Da Isoelectric Point: 5.0362
>NTDB_id=398089 HR076_RS17510 WP_001130208.1 3586690..3587205(-) (luxS) [Escherichia coli strain EcPF40]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARNILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=398089 HR076_RS17510 WP_001130208.1 3586690..3587205(-) (luxS) [Escherichia coli strain EcPF40]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCAAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCAAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGCGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTCGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAACATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |