Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BSN5_RS19535 Genome accession   NC_014976
Coordinates   3704274..3704858 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis BSn5     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3699274..3709858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSN5_RS19505 (BSn5_19160) dapD 3699460..3700170 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BSN5_RS19510 (BSn5_19165) dapI 3700240..3701364 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  BSN5_RS19515 (BSn5_19170) ykuS 3701426..3701671 (+) 246 WP_003232382.1 YkuS family protein -
  BSN5_RS19520 (BSn5_19175) mscT 3701708..3702511 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  BSN5_RS19525 (BSn5_19180) ahpA 3702748..3703290 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  BSN5_RS19530 (BSn5_19185) ykuV 3703362..3703808 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  BSN5_RS19535 (BSn5_19190) rok 3704274..3704858 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  BSN5_RS19540 (BSn5_19195) cse15 3704899..3705864 (-) 966 WP_015715807.1 spore protein Cse15 -
  BSN5_RS19545 (BSn5_19200) mobA 3706001..3706600 (+) 600 WP_015715808.1 molybdenum cofactor guanylyltransferase -
  BSN5_RS19550 (BSn5_19205) moeB 3706651..3707670 (+) 1020 WP_015715809.1 molybdopterin-synthase adenylyltransferase MoeB -
  BSN5_RS19555 (BSn5_19210) glp 3707688..3708980 (+) 1293 WP_015715810.1 gephyrin-like molybdotransferase Glp -
  BSN5_RS19560 (BSn5_19215) mobB 3708941..3709462 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=39806 BSN5_RS19535 WP_014113628.1 3704274..3704858(+) (rok) [Bacillus subtilis BSn5]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=39806 BSN5_RS19535 WP_014113628.1 3704274..3704858(+) (rok) [Bacillus subtilis BSn5]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment