Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BSN5_RS19430 Genome accession   NC_014976
Coordinates   3688393..3688857 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis BSn5     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3683393..3693857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSN5_RS19410 (BSn5_19065) kinA 3683860..3685680 (+) 1821 WP_015715804.1 sporulation histidine kinase KinA -
  BSN5_RS19415 (BSn5_19070) dapX 3685690..3686871 (-) 1182 WP_014476653.1 aminotransferase A -
  BSN5_RS19420 (BSn5_19075) - 3687073..3687234 (-) 162 WP_003245246.1 hypothetical protein -
  BSN5_RS19425 (BSn5_19080) cheV 3687438..3688349 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  BSN5_RS19430 (BSn5_19085) kre 3688393..3688857 (-) 465 WP_003232406.1 YkyB family protein Regulator
  BSN5_RS19435 (BSn5_19090) ykuC 3688983..3690275 (-) 1293 WP_003245267.1 MFS transporter -
  BSN5_RS19440 (BSn5_19095) ltdD 3690351..3690845 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  BSN5_RS19445 (BSn5_19100) ppeE 3690902..3691762 (-) 861 WP_003232400.1 metallophosphoesterase -
  BSN5_RS19450 (BSn5_19105) fadH 3691905..3692669 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=39805 BSN5_RS19430 WP_003232406.1 3688393..3688857(-) (kre) [Bacillus subtilis BSn5]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=39805 BSN5_RS19430 WP_003232406.1 3688393..3688857(-) (kre) [Bacillus subtilis BSn5]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment