Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   BSN5_RS18040 Genome accession   NC_014976
Coordinates   3440820..3441941 (+) Length   373 a.a.
NCBI ID   WP_010886479.1    Uniprot ID   O31604
Organism   Bacillus subtilis BSn5     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 3435820..3446941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSN5_RS18015 (BSn5_17650) yjbB 3436461..3437678 (+) 1218 WP_074794275.1 MFS transporter -
  BSN5_RS18020 (BSn5_17655) yjbC 3437843..3438421 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  BSN5_RS18025 (BSn5_17660) spx 3438602..3438997 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  BSN5_RS18030 (BSn5_17665) yjbE 3439040..3439696 (-) 657 WP_003232944.1 TerC family protein -
  BSN5_RS22030 - 3439866..3440006 (+) 141 WP_119122854.1 hypothetical protein -
  BSN5_RS18035 (BSn5_17670) mecA 3439973..3440629 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  BSN5_RS22035 - 3440624..3440746 (-) 123 WP_003245684.1 hypothetical protein -
  BSN5_RS18040 (BSn5_17675) coiA 3440820..3441941 (+) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  BSN5_RS18045 (BSn5_17680) pepF 3442171..3444000 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  BSN5_RS18050 (BSn5_17685) - 3444038..3444205 (-) 168 WP_003244944.1 hypothetical protein -
  BSN5_RS18060 (BSn5_17690) spxH 3444519..3445418 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  BSN5_RS18065 (BSn5_17695) bhbI 3445415..3445813 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  BSN5_RS18070 (BSn5_17700) cwlQ 3446068..3446802 (-) 735 WP_015715668.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43689.70 Da        Isoelectric Point: 10.1187

>NTDB_id=39801 BSN5_RS18040 WP_010886479.1 3440820..3441941(+) (coiA) [Bacillus subtilis BSn5]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRSECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=39801 BSN5_RS18040 WP_010886479.1 3440820..3441941(+) (coiA) [Bacillus subtilis BSn5]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCGCCATAGACATCGAGCCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTCCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB O31604

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment