Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   GII81_RS01975 Genome accession   NZ_CP045820
Coordinates   370012..370410 (-) Length   132 a.a.
NCBI ID   WP_015715226.1    Uniprot ID   A0AA96URL7
Organism   Bacillus subtilis strain MB9_B1     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 365012..375410
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII81_RS01945 (GII81_01945) yckA 365590..366270 (-) 681 WP_003234624.1 amino acid ABC transporter permease -
  GII81_RS01950 (GII81_01950) yckB 366280..367143 (-) 864 WP_029727074.1 transporter substrate-binding domain-containing protein -
  GII81_RS01955 (GII81_01955) - 367305..367502 (+) 198 WP_119122841.1 hypothetical protein -
  GII81_RS01960 (GII81_01960) yckC 367521..367976 (+) 456 WP_029727075.1 RDD family protein -
  GII81_RS01965 (GII81_01965) yckD 368058..368390 (+) 333 WP_015252849.1 YckD family protein -
  GII81_RS01970 (GII81_01970) bglC 368542..369975 (+) 1434 WP_029727076.1 6-phospho-beta-glucosidase -
  GII81_RS01975 (GII81_01975) nin/comJ 370012..370410 (-) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  GII81_RS01980 (GII81_01980) nucA/comI 370437..370886 (-) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  GII81_RS01985 (GII81_01985) tlpC 371054..372775 (-) 1722 WP_029727077.1 methyl-accepting chemotaxis protein TlpC -
  GII81_RS01990 (GII81_01990) hxlB 372886..373443 (-) 558 WP_003234605.1 6-phospho-3-hexuloisomerase -
  GII81_RS01995 (GII81_01995) hxlA 373449..374081 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  GII81_RS02000 (GII81_02000) hxlR 374314..374676 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14935.90 Da        Isoelectric Point: 4.8991

>NTDB_id=397947 GII81_RS01975 WP_015715226.1 370012..370410(-) (nin/comJ) [Bacillus subtilis strain MB9_B1]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=397947 GII81_RS01975 WP_015715226.1 370012..370410(-) (nin/comJ) [Bacillus subtilis strain MB9_B1]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985

Multiple sequence alignment