Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   HR084_RS18820 Genome accession   NZ_CP054177
Coordinates   3688806..3689180 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain JCL16     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3683806..3694180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HR084_RS18795 (HR084_18795) - 3683970..3684131 (-) 162 WP_003227632.1 hypothetical protein -
  HR084_RS18800 (HR084_18800) glpX 3684346..3685311 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  HR084_RS18805 (HR084_18805) murAB 3685342..3686631 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  HR084_RS18810 (HR084_18810) fsa 3687010..3687648 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  HR084_RS18815 (HR084_18815) fbaA 3687768..3688625 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  HR084_RS18820 (HR084_18820) letA 3688806..3689180 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  HR084_RS18825 (HR084_18825) ywjG 3689346..3689867 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  HR084_RS18830 (HR084_18830) pyrG 3689949..3691556 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  HR084_RS18835 (HR084_18835) rpoE 3691798..3692319 (-) 522 WP_003227609.1 DNA-directed RNA polymerase subunit delta -
  HR084_RS18840 (HR084_18840) acdA 3692502..3693641 (-) 1140 WP_038429780.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=397890 HR084_RS18820 WP_003227621.1 3688806..3689180(-) (letA) [Bacillus subtilis strain JCL16]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=397890 HR084_RS18820 WP_003227621.1 3688806..3689180(-) (letA) [Bacillus subtilis strain JCL16]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363

Multiple sequence alignment