Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BSN5_RS16400 Genome accession   NC_014976
Coordinates   3136532..3137326 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis BSn5     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3131532..3142326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSN5_RS16370 (BSn5_16095) sxzA 3132370..3133401 (+) 1032 WP_015715532.1 iron ABC transporter permease -
  BSN5_RS16375 (BSn5_16100) yfhB 3133517..3134398 (+) 882 WP_015715533.1 PhzF family phenazine biosynthesis isomerase -
  BSN5_RS16380 (BSn5_16105) yfhC 3134486..3135070 (+) 585 WP_003243940.1 nitroreductase -
  BSN5_RS16385 (BSn5_16110) yfhD 3135109..3135300 (-) 192 WP_003233561.1 YfhD family protein -
  BSN5_RS16390 (BSn5_16115) yfhE 3135367..3135477 (-) 111 WP_003223230.1 YfhE family protein -
  BSN5_RS16395 (BSn5_16120) yfhF 3135532..3136443 (-) 912 WP_015715534.1 TIGR01777 family oxidoreductase -
  BSN5_RS16400 (BSn5_16125) recX 3136532..3137326 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  BSN5_RS16405 (BSn5_16130) yfhH 3137328..3137642 (+) 315 WP_003244592.1 YfhH family protein -
  BSN5_RS16415 (BSn5_16135) yfhI 3137763..3138956 (+) 1194 WP_015715535.1 MFS transporter -
  BSN5_RS16420 (BSn5_16140) sspK 3138988..3139140 (-) 153 WP_015715536.1 small, acid-soluble spore protein K -
  BSN5_RS16425 (BSn5_16145) yfhJ 3139265..3139534 (+) 270 WP_003243789.1 YfhJ family protein -
  BSN5_RS16430 (BSn5_16150) yfhK 3139679..3140197 (+) 519 WP_015715537.1 SH3 domain-containing protein -
  BSN5_RS16435 (BSn5_16155) spdL 3140282..3140614 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  BSN5_RS16440 (BSn5_16160) ephM 3140601..3141461 (+) 861 WP_015715538.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=39788 BSN5_RS16400 WP_003243354.1 3136532..3137326(+) (recX) [Bacillus subtilis BSn5]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=39788 BSN5_RS16400 WP_003243354.1 3136532..3137326(+) (recX) [Bacillus subtilis BSn5]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTTCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTATTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment