Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   HR084_RS17510 Genome accession   NZ_CP054177
Coordinates   3436552..3437265 (-) Length   237 a.a.
NCBI ID   WP_173614322.1    Uniprot ID   -
Organism   Bacillus subtilis strain JCL16     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3431552..3442265
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HR084_RS17490 (HR084_17490) ghrB 3431696..3432673 (+) 978 WP_015251153.1 D-glycerate dehydrogenase -
  HR084_RS17495 (HR084_17495) psdB 3432711..3434651 (-) 1941 WP_106073367.1 lantibiotic ABC transporter permease PsdB -
  HR084_RS17500 (HR084_17500) psdA 3434626..3435405 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  HR084_RS17505 (HR084_17505) psdS 3435488..3436558 (-) 1071 WP_165634575.1 two-component sensor histidine kinase PsdS -
  HR084_RS17510 (HR084_17510) braR 3436552..3437265 (-) 714 WP_173614322.1 two-component system response regulator PsdR Regulator
  HR084_RS17515 (HR084_17515) - 3437412..3437621 (+) 210 WP_124059204.1 hypothetical protein -
  HR084_RS17520 (HR084_17520) yvcN 3437657..3438421 (-) 765 WP_173614323.1 arylamine N-acetyltransferase -
  HR084_RS17525 (HR084_17525) crh 3438422..3438679 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  HR084_RS17530 (HR084_17530) whiA 3438703..3439653 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  HR084_RS17535 (HR084_17535) mgfK 3439676..3440629 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  HR084_RS17540 (HR084_17540) rapZ 3440631..3441518 (-) 888 WP_003243903.1 RNase adapter RapZ -
  HR084_RS17545 (HR084_17545) rppI 3441543..3442019 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27556.47 Da        Isoelectric Point: 4.7567

>NTDB_id=397879 HR084_RS17510 WP_173614322.1 3436552..3437265(-) (braR) [Bacillus subtilis strain JCL16]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRKVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=397879 HR084_RS17510 WP_173614322.1 3436552..3437265(-) (braR) [Bacillus subtilis strain JCL16]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTCCTGCTTGATATTA
ACCTTCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCAATTATTTTTATTTCAGCG
CGGACTGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAACCGTTCCATTTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAAAAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment