Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | GII82_RS01975 | Genome accession | NZ_CP045819 |
| Coordinates | 370441..370890 (-) | Length | 149 a.a. |
| NCBI ID | WP_003234608.1 | Uniprot ID | A0A8E0S750 |
| Organism | Bacillus subtilis strain MB9_B4 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 365441..375890
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII82_RS01940 (GII82_01940) | yckA | 365594..366274 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| GII82_RS01945 (GII82_01945) | yckB | 366284..367147 (-) | 864 | WP_029727074.1 | transporter substrate-binding domain-containing protein | - |
| GII82_RS01950 (GII82_01950) | - | 367309..367506 (+) | 198 | WP_119122841.1 | hypothetical protein | - |
| GII82_RS01955 (GII82_01955) | yckC | 367525..367980 (+) | 456 | WP_029727075.1 | RDD family protein | - |
| GII82_RS01960 (GII82_01960) | yckD | 368062..368394 (+) | 333 | WP_015252849.1 | YckD family protein | - |
| GII82_RS01965 (GII82_01965) | bglC | 368546..369979 (+) | 1434 | WP_029727076.1 | 6-phospho-beta-glucosidase | - |
| GII82_RS01970 (GII82_01970) | nin/comJ | 370016..370414 (-) | 399 | WP_015715226.1 | DNA-entry nuclease inhibitor | Regulator |
| GII82_RS01975 (GII82_01975) | nucA/comI | 370441..370890 (-) | 450 | WP_003234608.1 | DNA-entry nuclease | Machinery gene |
| GII82_RS01980 (GII82_01980) | tlpC | 371058..372779 (-) | 1722 | WP_029727077.1 | methyl-accepting chemotaxis protein TlpC | - |
| GII82_RS01985 (GII82_01985) | hxlB | 372890..373447 (-) | 558 | WP_003234605.1 | 6-phospho-3-hexuloisomerase | - |
| GII82_RS01990 (GII82_01990) | hxlA | 373453..374085 (-) | 633 | WP_003234604.1 | 3-hexulose-6-phosphate synthase | - |
| GII82_RS01995 (GII82_01995) | hxlR | 374318..374680 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16470.42 Da Isoelectric Point: 4.5282
>NTDB_id=397867 GII82_RS01975 WP_003234608.1 370441..370890(-) (nucA/comI) [Bacillus subtilis strain MB9_B4]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSTDQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSTDQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=397867 GII82_RS01975 WP_003234608.1 370441..370890(-) (nucA/comI) [Bacillus subtilis strain MB9_B4]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTTTCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGACACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTTTCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGACACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
97.987 |
100 |
0.98 |