Detailed information
Bioinformatically predicted
Overview
| Name | rapF | Type | Regulator |
| Locus tag | GII83_RS19185 | Genome accession | NZ_CP045818 |
| Coordinates | 3723810..3724955 (+) | Length | 381 a.a. |
| NCBI ID | WP_015714890.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain MB9_B6 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3718810..3729955
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII83_RS19160 (GII83_19160) | albF | 3718826..3720106 (+) | 1281 | WP_029726079.1 | pitrilysin family protein | - |
| GII83_RS19165 (GII83_19165) | albG | 3720103..3720804 (+) | 702 | WP_153940242.1 | antilisterial bacteriocin subtilosin biosynthesis protein AlbG | - |
| GII83_RS19170 (GII83_19170) | ywhL | 3720810..3722186 (-) | 1377 | WP_015250987.1 | YncE family protein | - |
| GII83_RS19175 (GII83_19175) | ywhK | 3722225..3723580 (-) | 1356 | WP_003227552.1 | YncE family protein | - |
| GII83_RS19185 (GII83_19185) | rapF | 3723810..3724955 (+) | 1146 | WP_015714890.1 | response regulator aspartate phosphatase RapF | Regulator |
| GII83_RS19190 (GII83_19190) | phrF | 3724939..3725058 (+) | 120 | WP_009968329.1 | phosphatase RapF inhibitor PhrF | Regulator |
| GII83_RS19195 (GII83_19195) | - | 3725315..3725794 (+) | 480 | WP_015714892.1 | hypothetical protein | - |
| GII83_RS19200 (GII83_19200) | - | 3725943..3726731 (+) | 789 | WP_015714893.1 | membrane protein | - |
| GII83_RS19205 (GII83_19205) | - | 3726718..3727392 (+) | 675 | WP_015714894.1 | hypothetical protein | - |
| GII83_RS19210 (GII83_19210) | - | 3727402..3728199 (+) | 798 | WP_231573542.1 | hypothetical protein | - |
| GII83_RS19215 (GII83_19215) | - | 3728202..3728849 (+) | 648 | WP_015714896.1 | ABC transporter ATP-binding protein | - |
| GII83_RS19220 (GII83_19220) | - | 3728842..3729402 (+) | 561 | WP_029726083.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 381 a.a. Molecular weight: 45571.01 Da Isoelectric Point: 4.9848
>NTDB_id=397854 GII83_RS19185 WP_015714890.1 3723810..3724955(+) (rapF) [Bacillus subtilis strain MB9_B6]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLNLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLNLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV
Nucleotide
Download Length: 1146 bp
>NTDB_id=397854 GII83_RS19185 WP_015714890.1 3723810..3724955(+) (rapF) [Bacillus subtilis strain MB9_B6]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTAATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTAAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTAATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTAAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
98.688 |
100 |
0.987 |
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
57.368 |
99.738 |
0.572 |