Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   GII83_RS07535 Genome accession   NZ_CP045818
Coordinates   1445886..1446350 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain MB9_B6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1440886..1451350
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII83_RS07515 (GII83_07515) kinA 1441353..1443173 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  GII83_RS07520 (GII83_07520) dapX 1443183..1444364 (-) 1182 WP_014476653.1 aminotransferase A -
  GII83_RS07525 (GII83_07525) - 1444566..1444727 (-) 162 WP_003245246.1 hypothetical protein -
  GII83_RS07530 (GII83_07530) cheV 1444931..1445842 (+) 912 WP_029727006.1 chemotaxis protein CheV -
  GII83_RS07535 (GII83_07535) kre 1445886..1446350 (-) 465 WP_003232406.1 YkyB family protein Regulator
  GII83_RS07540 (GII83_07540) ykuC 1446476..1447768 (-) 1293 WP_029727007.1 MFS transporter -
  GII83_RS07545 (GII83_07545) ltdD 1447844..1448338 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  GII83_RS07550 (GII83_07550) ppeE 1448390..1449253 (-) 864 WP_029727008.1 metallophosphoesterase -
  GII83_RS07555 (GII83_07555) fadH 1449396..1450160 (+) 765 WP_029727009.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=397810 GII83_RS07535 WP_003232406.1 1445886..1446350(-) (kre) [Bacillus subtilis strain MB9_B6]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=397810 GII83_RS07535 WP_003232406.1 1445886..1446350(-) (kre) [Bacillus subtilis strain MB9_B6]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment